Gene : Glyma.05G232600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11941:SF47 - 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 3, MITOCHONDRIAL-RELATED Genomic Order:  2326
Name:  ? Glyma.05G232600 Secondary Identifier:  ? PAC:30527092
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7574 Glycine max pathologic  
Gmax VALDEG-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G232600 0.5kb upstream 0.5kb upstream 6685 true Chr05: 41009142-41015826 Glycine max
Glyma.05G232600 0.5kb upstream 0.5kb upstream 500 false Chr05: 41009142-41009641 Glycine max
Glyma.05G232600 0.5kb downstream 0.5kb downstream 6685 true Chr05: 41009642-41016326 Glycine max
Glyma.05G232600 0.5kb downstream 0.5kb downstream 500 false Chr05: 41015827-41016326 Glycine max
Glyma.05G232600 1.0kb upstream 1.0kb upstream 7185 true Chr05: 41008642-41015826 Glycine max
Glyma.05G232600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 41008642-41009641 Glycine max
Glyma.05G232600 1.0kb downstream 1.0kb downstream 7185 true Chr05: 41009642-41016826 Glycine max
Glyma.05G232600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 41015827-41016826 Glycine max
Glyma.05G232600 2.0kb upstream 2.0kb upstream 8185 true Chr05: 41007642-41015826 Glycine max
Glyma.05G232600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 41007642-41009641 Glycine max
Glyma.05G232600 2.0kb downstream 2.0kb downstream 8185 true Chr05: 41009642-41017826 Glycine max
Glyma.05G232600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 41015827-41017826 Glycine max
Glyma.05G232600 5.0kb upstream 5.0kb upstream 11185 true Chr05: 41004642-41015826 Glycine max
Glyma.05G232600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 41004642-41009641 Glycine max
Glyma.05G232600 5.0kb downstream 5.0kb downstream 11185 true Chr05: 41009642-41020826 Glycine max
Glyma.05G232600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 41015827-41020826 Glycine max
Glyma.05G232600 10.0kb upstream 10.0kb upstream 16185 true Chr05: 40999642-41015826 Glycine max
Glyma.05G232600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40999642-41009641 Glycine max
Glyma.05G232600 10.0kb downstream 10.0kb downstream 16185 true Chr05: 41009642-41025826 Glycine max
Glyma.05G232600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 41015827-41025826 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312703 5265 Fabidae View MSA
124062790 5270 Rosid View MSA
123736402 5271 Pentapetalae View MSA
122794984 5272 Eudicot View MSA
122043157 5273 Angiosperm View MSA
121344613 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.1349 0.0 48.7938   Low
cufflinks 24.4561 0.0 89.8794 High  
cufflinks 14.482 0.0 53.5024   Low
cufflinks 23.9758 0.0 88.8959 High  
cufflinks 20.2962 0.0 82.9161 High  
cufflinks 16.2988 0.0 59.4418    
cufflinks 29.8497 0.0 112.662 High High
cufflinks 22.6474 0.0 82.5694 High  
cufflinks 16.1453 0.0 59.0101    
cufflinks 3.377        
cufflinks 0.847       Low
cufflinks 2.873        
cufflinks 3.054        
cufflinks 3.065        
cufflinks 0.731       Low
cufflinks 2.299        
cufflinks 1.346        
cufflinks 3.759       High
cufflinks 3.941       High
cufflinks 2.479        
cufflinks 1.147       Low
cufflinks 2.552        
cufflinks 2.323        
cufflinks 1.02       Low
cufflinks 2.422        
cufflinks 1.193        

0 Strain