Gene : Glyma.05G233000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR17224//PTHR17224:SF5 - PEPTIDYL-TRNA HYDROLASE Genomic Order:  2330
Name:  ? Glyma.05G233000 Secondary Identifier:  ? PAC:30526230
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G233000 0.5kb upstream 0.5kb upstream 3578 true Chr05: 41036663-41040240 Glycine max
Glyma.05G233000 0.5kb upstream 0.5kb upstream 500 false Chr05: 41039741-41040240 Glycine max
Glyma.05G233000 0.5kb downstream 0.5kb downstream 3578 true Chr05: 41036163-41039740 Glycine max
Glyma.05G233000 0.5kb downstream 0.5kb downstream 500 false Chr05: 41036163-41036662 Glycine max
Glyma.05G233000 1.0kb upstream 1.0kb upstream 4078 true Chr05: 41036663-41040740 Glycine max
Glyma.05G233000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 41039741-41040740 Glycine max
Glyma.05G233000 1.0kb downstream 1.0kb downstream 4078 true Chr05: 41035663-41039740 Glycine max
Glyma.05G233000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 41035663-41036662 Glycine max
Glyma.05G233000 2.0kb upstream 2.0kb upstream 5078 true Chr05: 41036663-41041740 Glycine max
Glyma.05G233000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 41039741-41041740 Glycine max
Glyma.05G233000 2.0kb downstream 2.0kb downstream 5078 true Chr05: 41034663-41039740 Glycine max
Glyma.05G233000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 41034663-41036662 Glycine max
Glyma.05G233000 5.0kb upstream 5.0kb upstream 8078 true Chr05: 41036663-41044740 Glycine max
Glyma.05G233000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 41039741-41044740 Glycine max
Glyma.05G233000 5.0kb downstream 5.0kb downstream 8078 true Chr05: 41031663-41039740 Glycine max
Glyma.05G233000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 41031663-41036662 Glycine max
Glyma.05G233000 10.0kb upstream 10.0kb upstream 13078 true Chr05: 41036663-41049740 Glycine max
Glyma.05G233000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 41039741-41049740 Glycine max
Glyma.05G233000 10.0kb downstream 10.0kb downstream 13078 true Chr05: 41026663-41039740 Glycine max
Glyma.05G233000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 41026663-41036662 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301647 5265 Fabidae View MSA
124063033 5270 Rosid View MSA
123738074 5271 Pentapetalae View MSA
122785873 5272 Eudicot View MSA
122049044 5273 Angiosperm View MSA
121347021 5274 Embryophyte View MSA
123426354 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.50103 0.0 26.5427   High
cufflinks 3.91779 0.0 12.2151    
cufflinks 5.25034 0.0 15.6677    
cufflinks 4.04663 0.0 12.5567    
cufflinks 3.81939 0.0 11.9992    
cufflinks 8.53873 0.0 24.0713   High
cufflinks 3.27102 0.0 10.5039    
cufflinks 3.51633 0.0 11.1291    
cufflinks 3.875 0.0 12.1123    
cufflinks 1.821       Low
cufflinks 9.434     High High
cufflinks 2.787        
cufflinks 2.016       Low
cufflinks 1.567       Low
cufflinks 3.355        
cufflinks 3.951        
cufflinks 6.238     High  
cufflinks 1.819       Low
cufflinks 1.808       Low
cufflinks 5.899        
cufflinks 3.675        
cufflinks 4.592        
cufflinks 5.059        
cufflinks 6.383     High High
cufflinks 5.0        
cufflinks 5.298        

0 Strain