Gene : Glyma.05G234300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23139//PTHR23139:SF66 - RNA-BINDING PROTEIN Genomic Order:  2343
Name:  ? Glyma.05G234300 Secondary Identifier:  ? PAC:30524407
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G234300 0.5kb upstream 0.5kb upstream 3988 true Chr05: 41140855-41144842 Glycine max
Glyma.05G234300 0.5kb upstream 0.5kb upstream 500 false Chr05: 41140855-41141354 Glycine max
Glyma.05G234300 0.5kb downstream 0.5kb downstream 3988 true Chr05: 41141355-41145342 Glycine max
Glyma.05G234300 0.5kb downstream 0.5kb downstream 500 false Chr05: 41144843-41145342 Glycine max
Glyma.05G234300 1.0kb upstream 1.0kb upstream 4488 true Chr05: 41140355-41144842 Glycine max
Glyma.05G234300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 41140355-41141354 Glycine max
Glyma.05G234300 1.0kb downstream 1.0kb downstream 4488 true Chr05: 41141355-41145842 Glycine max
Glyma.05G234300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 41144843-41145842 Glycine max
Glyma.05G234300 2.0kb upstream 2.0kb upstream 5488 true Chr05: 41139355-41144842 Glycine max
Glyma.05G234300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 41139355-41141354 Glycine max
Glyma.05G234300 2.0kb downstream 2.0kb downstream 5488 true Chr05: 41141355-41146842 Glycine max
Glyma.05G234300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 41144843-41146842 Glycine max
Glyma.05G234300 5.0kb upstream 5.0kb upstream 8488 true Chr05: 41136355-41144842 Glycine max
Glyma.05G234300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 41136355-41141354 Glycine max
Glyma.05G234300 5.0kb downstream 5.0kb downstream 8488 true Chr05: 41141355-41149842 Glycine max
Glyma.05G234300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 41144843-41149842 Glycine max
Glyma.05G234300 10.0kb upstream 10.0kb upstream 13488 true Chr05: 41131355-41144842 Glycine max
Glyma.05G234300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 41131355-41141354 Glycine max
Glyma.05G234300 10.0kb downstream 10.0kb downstream 13488 true Chr05: 41141355-41154842 Glycine max
Glyma.05G234300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 41144843-41154842 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304981 5265 Fabidae View MSA
124068050 5270 Rosid View MSA
123743802 5271 Pentapetalae View MSA
122790530 5272 Eudicot View MSA
122047712 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121310781 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.8747 0.0 59.1974   High
cufflinks 13.6387 0.0 40.6064    
cufflinks 15.5659 0.0 53.3755    
cufflinks 15.3196 0.0 57.6069    
cufflinks 14.3453 0.0 48.2018    
cufflinks 11.0759 0.0 35.1752   Low
cufflinks 14.6094 0.0 50.2258    
cufflinks 12.7447 0.0 48.2798    
cufflinks 13.7859 0.0 46.163    
cufflinks 1.438        
cufflinks 1.376       Low
cufflinks 2.396        
cufflinks 2.096        
cufflinks 2.126        
cufflinks 1.662        
cufflinks 2.174        
cufflinks 1.105       Low
cufflinks 2.695       High
cufflinks 2.468        
cufflinks 2.387        
cufflinks 1.339       Low
cufflinks 2.486        
cufflinks 2.409        
cufflinks 1.428        
cufflinks 2.519        
cufflinks 1.355       Low

0 Strain