Gene : Glyma.05G234800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11880:SF10 - 40S RIBOSOMAL PROTEIN S15-6 Genomic Order:  2348
Name:  ? Glyma.05G234800 Secondary Identifier:  ? PAC:30525356
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G234800 0.5kb upstream 0.5kb upstream 2310 true Chr05: 41171514-41173823 Glycine max
Glyma.05G234800 0.5kb upstream 0.5kb upstream 500 false Chr05: 41171514-41172013 Glycine max
Glyma.05G234800 0.5kb downstream 0.5kb downstream 2310 true Chr05: 41172014-41174323 Glycine max
Glyma.05G234800 0.5kb downstream 0.5kb downstream 500 false Chr05: 41173824-41174323 Glycine max
Glyma.05G234800 1.0kb upstream 1.0kb upstream 2810 true Chr05: 41171014-41173823 Glycine max
Glyma.05G234800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 41171014-41172013 Glycine max
Glyma.05G234800 1.0kb downstream 1.0kb downstream 2810 true Chr05: 41172014-41174823 Glycine max
Glyma.05G234800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 41173824-41174823 Glycine max
Glyma.05G234800 2.0kb upstream 2.0kb upstream 3810 true Chr05: 41170014-41173823 Glycine max
Glyma.05G234800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 41170014-41172013 Glycine max
Glyma.05G234800 2.0kb downstream 2.0kb downstream 3810 true Chr05: 41172014-41175823 Glycine max
Glyma.05G234800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 41173824-41175823 Glycine max
Glyma.05G234800 5.0kb upstream 5.0kb upstream 6810 true Chr05: 41167014-41173823 Glycine max
Glyma.05G234800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 41167014-41172013 Glycine max
Glyma.05G234800 5.0kb downstream 5.0kb downstream 6810 true Chr05: 41172014-41178823 Glycine max
Glyma.05G234800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 41173824-41178823 Glycine max
Glyma.05G234800 10.0kb upstream 10.0kb upstream 11810 true Chr05: 41162014-41173823 Glycine max
Glyma.05G234800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 41162014-41172013 Glycine max
Glyma.05G234800 10.0kb downstream 10.0kb downstream 11810 true Chr05: 41172014-41183823 Glycine max
Glyma.05G234800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 41173824-41183823 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312187 5265 Fabidae View MSA
124072924 5270 Rosid View MSA
123737007 5271 Pentapetalae View MSA
122786475 5272 Eudicot View MSA
122041885 5273 Angiosperm View MSA
121349053 5274 Embryophyte View MSA
123425446 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 69.8758 0.0 194.586 High  
cufflinks 101.032 0.0 293.745 High  
cufflinks 48.6865 0.0 131.932 High Low
cufflinks 49.8567 0.0 135.271 High Low
cufflinks 179.337 0.0 575.85 High High
cufflinks 165.71 0.0 524.105 High High
cufflinks 151.985 0.0 471.416 High  
cufflinks 105.778 0.0 310.188 High  
cufflinks 114.708 0.0 340.628 High  
cufflinks 58.198     High  
cufflinks 11.55     High Low
cufflinks 34.953     High  
cufflinks 156.444     High High
cufflinks 239.128     High High
cufflinks 12.95     High Low
cufflinks 29.308     High  
cufflinks 34.733     High  
cufflinks 37.714     High  
cufflinks 66.516     High  
cufflinks 18.623     High  
cufflinks 21.13     High  
cufflinks 22.214     High  
cufflinks 55.725     High  
cufflinks 15.659     High  
cufflinks 23.781     High  
cufflinks 31.16     High  

0 Strain