Gene : Glyma.05G235300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12701:SF12 - GB Genomic Order:  2353
Name:  ? Glyma.05G235300 Secondary Identifier:  ? PAC:30525693
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G235300 0.5kb upstream 0.5kb upstream 4288 true Chr05: 41205087-41209374 Glycine max
Glyma.05G235300 0.5kb upstream 0.5kb upstream 500 false Chr05: 41205087-41205586 Glycine max
Glyma.05G235300 0.5kb downstream 0.5kb downstream 4288 true Chr05: 41205587-41209874 Glycine max
Glyma.05G235300 0.5kb downstream 0.5kb downstream 500 false Chr05: 41209375-41209874 Glycine max
Glyma.05G235300 1.0kb upstream 1.0kb upstream 4788 true Chr05: 41204587-41209374 Glycine max
Glyma.05G235300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 41204587-41205586 Glycine max
Glyma.05G235300 1.0kb downstream 1.0kb downstream 4788 true Chr05: 41205587-41210374 Glycine max
Glyma.05G235300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 41209375-41210374 Glycine max
Glyma.05G235300 2.0kb upstream 2.0kb upstream 5788 true Chr05: 41203587-41209374 Glycine max
Glyma.05G235300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 41203587-41205586 Glycine max
Glyma.05G235300 2.0kb downstream 2.0kb downstream 5788 true Chr05: 41205587-41211374 Glycine max
Glyma.05G235300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 41209375-41211374 Glycine max
Glyma.05G235300 5.0kb upstream 5.0kb upstream 8788 true Chr05: 41200587-41209374 Glycine max
Glyma.05G235300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 41200587-41205586 Glycine max
Glyma.05G235300 5.0kb downstream 5.0kb downstream 8788 true Chr05: 41205587-41214374 Glycine max
Glyma.05G235300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 41209375-41214374 Glycine max
Glyma.05G235300 10.0kb upstream 10.0kb upstream 13788 true Chr05: 41195587-41209374 Glycine max
Glyma.05G235300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 41195587-41205586 Glycine max
Glyma.05G235300 10.0kb downstream 10.0kb downstream 13788 true Chr05: 41205587-41219374 Glycine max
Glyma.05G235300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 41209375-41219374 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041316 5273 Angiosperm View MSA
122304712 5265 Fabidae View MSA
124062686 5270 Rosid View MSA
123746776 5271 Pentapetalae View MSA
122788736 5272 Eudicot View MSA
121348812 5274 Embryophyte View MSA
123381026 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.8126 0.0 52.8603    
cufflinks 19.9402 0.0 53.2091    
cufflinks 12.4156 0.0 33.3904   Low
cufflinks 15.5293 0.0 41.5122   Low
cufflinks 35.5563 0.0 96.8621 High High
cufflinks 26.8706 0.0 72.1931 High  
cufflinks 23.7003 0.0 63.3551 High  
cufflinks 23.2692 0.0 62.2131 High  
cufflinks 20.2022 0.0 53.9177 High  
cufflinks 9.056     High  
cufflinks 5.093        
cufflinks 4.858        
cufflinks 12.398     High High
cufflinks 17.634     High High
cufflinks 2.793       Low
cufflinks 3.578        
cufflinks 10.268     High High
cufflinks 5.299        
cufflinks 7.23        
cufflinks 2.523       Low
cufflinks 3.576        
cufflinks 2.835       Low
cufflinks 5.474        
cufflinks 4.666        
cufflinks 2.916       Low
cufflinks 5.316        

0 Strain