Gene : Glyma.05G222800 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR11034:SF23 - N-MYC DOWNREGULATED-LIKE 3 PROTEIN Genomic Order:  2228
Name:  ? Glyma.05G222800 Secondary Identifier:  ? PAC:30525485
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G222800 0.5kb upstream 0.5kb upstream 4629 true Chr05: 40220377-40225005 Glycine max
Glyma.05G222800 0.5kb upstream 0.5kb upstream 500 false Chr05: 40220377-40220876 Glycine max
Glyma.05G222800 0.5kb downstream 0.5kb downstream 4629 true Chr05: 40220877-40225505 Glycine max
Glyma.05G222800 0.5kb downstream 0.5kb downstream 500 false Chr05: 40225006-40225505 Glycine max
Glyma.05G222800 1.0kb upstream 1.0kb upstream 5129 true Chr05: 40219877-40225005 Glycine max
Glyma.05G222800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40219877-40220876 Glycine max
Glyma.05G222800 1.0kb downstream 1.0kb downstream 5129 true Chr05: 40220877-40226005 Glycine max
Glyma.05G222800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40225006-40226005 Glycine max
Glyma.05G222800 2.0kb upstream 2.0kb upstream 6129 true Chr05: 40218877-40225005 Glycine max
Glyma.05G222800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40218877-40220876 Glycine max
Glyma.05G222800 2.0kb downstream 2.0kb downstream 6129 true Chr05: 40220877-40227005 Glycine max
Glyma.05G222800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40225006-40227005 Glycine max
Glyma.05G222800 5.0kb upstream 5.0kb upstream 9129 true Chr05: 40215877-40225005 Glycine max
Glyma.05G222800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40215877-40220876 Glycine max
Glyma.05G222800 5.0kb downstream 5.0kb downstream 9129 true Chr05: 40220877-40230005 Glycine max
Glyma.05G222800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40225006-40230005 Glycine max
Glyma.05G222800 10.0kb upstream 10.0kb upstream 14129 true Chr05: 40210877-40225005 Glycine max
Glyma.05G222800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40210877-40220876 Glycine max
Glyma.05G222800 10.0kb downstream 10.0kb downstream 14129 true Chr05: 40220877-40235005 Glycine max
Glyma.05G222800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40225006-40235005 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299101 5265 Fabidae View MSA
124071063 5270 Rosid View MSA
123743242 5271 Pentapetalae View MSA
122795895 5272 Eudicot View MSA
122051433 5273 Angiosperm View MSA
121349062 5274 Embryophyte View MSA
123381146 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.15322 0.0 12.6577   Low
cufflinks 2.54603 0.0 14.0162   Low
cufflinks 9.1808 0.0 34.5373    
cufflinks 12.6847 0.0 48.2828   High
cufflinks 6.94504 0.0 28.2184    
cufflinks 15.8792 0.0 58.0675   High
cufflinks 2.41887 0.0 13.9308   Low
cufflinks 7.95666 0.0 32.191    
cufflinks 5.363 0.0 23.5295    
cufflinks 1.34       High
cufflinks 0.775        
cufflinks 0.759        
cufflinks 2.036       High
cufflinks 1.818       High
cufflinks 0.555       Low
cufflinks 0.756        
cufflinks 0.849        
cufflinks 0.947        
cufflinks 0.552       Low
cufflinks 0.809        
cufflinks 1.032        
cufflinks 0.909        
cufflinks 0.647        
cufflinks 0.664        
cufflinks 0.797        
cufflinks 0.966        

0 Strain