Gene : Glyma.05G223000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11751:SF418 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 7 Genomic Order:  2230
Name:  ? Glyma.05G223000 Secondary Identifier:  ? PAC:30527418
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ETHYL-PWY Glycine max pathologic  
Gmax PWY-7270 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G223000 0.5kb upstream 0.5kb upstream 2370 true Chr05: 40247724-40250093 Glycine max
Glyma.05G223000 0.5kb upstream 0.5kb upstream 500 false Chr05: 40247724-40248223 Glycine max
Glyma.05G223000 0.5kb downstream 0.5kb downstream 2370 true Chr05: 40248224-40250593 Glycine max
Glyma.05G223000 0.5kb downstream 0.5kb downstream 500 false Chr05: 40250094-40250593 Glycine max
Glyma.05G223000 1.0kb upstream 1.0kb upstream 2870 true Chr05: 40247224-40250093 Glycine max
Glyma.05G223000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40247224-40248223 Glycine max
Glyma.05G223000 1.0kb downstream 1.0kb downstream 2870 true Chr05: 40248224-40251093 Glycine max
Glyma.05G223000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40250094-40251093 Glycine max
Glyma.05G223000 2.0kb upstream 2.0kb upstream 3870 true Chr05: 40246224-40250093 Glycine max
Glyma.05G223000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40246224-40248223 Glycine max
Glyma.05G223000 2.0kb downstream 2.0kb downstream 3870 true Chr05: 40248224-40252093 Glycine max
Glyma.05G223000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40250094-40252093 Glycine max
Glyma.05G223000 5.0kb upstream 5.0kb upstream 6870 true Chr05: 40243224-40250093 Glycine max
Glyma.05G223000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40243224-40248223 Glycine max
Glyma.05G223000 5.0kb downstream 5.0kb downstream 6870 true Chr05: 40248224-40255093 Glycine max
Glyma.05G223000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40250094-40255093 Glycine max
Glyma.05G223000 10.0kb upstream 10.0kb upstream 11870 true Chr05: 40238224-40250093 Glycine max
Glyma.05G223000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40238224-40248223 Glycine max
Glyma.05G223000 10.0kb downstream 10.0kb downstream 11870 true Chr05: 40248224-40260093 Glycine max
Glyma.05G223000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40250094-40260093 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305165 5265 Fabidae View MSA
124060897 5270 Rosid View MSA
123744717 5271 Pentapetalae View MSA
122791155 5272 Eudicot View MSA
122050984 5273 Angiosperm View MSA
121312233 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0132966 0.0 0.0601339 Low  
cufflinks 0.0385751 0.0 0.159964 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0112053 0.0 0.0514789 Low  
cufflinks 0.543465 0.0 2.00771   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0393667 0.0 0.162956 Low  
cufflinks 0.092     Low  
cufflinks 1.108        
cufflinks 0.018     Low  
cufflinks 1.299        
cufflinks 0.006     Low Low
cufflinks 0.1        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 9.137     High High
cufflinks 0.051     Low  
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.522        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.339        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.34       High

0 Strain