Gene : Glyma.05G223800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10956 - 60S RIBOSOMAL PROTEIN L31 Genomic Order:  2238
Name:  ? Glyma.05G223800 Secondary Identifier:  ? PAC:30527510
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G223800 0.5kb upstream 0.5kb upstream 1460 true Chr05: 40293631-40295090 Glycine max
Glyma.05G223800 0.5kb upstream 0.5kb upstream 500 false Chr05: 40293631-40294130 Glycine max
Glyma.05G223800 0.5kb downstream 0.5kb downstream 1460 true Chr05: 40294131-40295590 Glycine max
Glyma.05G223800 0.5kb downstream 0.5kb downstream 500 false Chr05: 40295091-40295590 Glycine max
Glyma.05G223800 1.0kb upstream 1.0kb upstream 1960 true Chr05: 40293131-40295090 Glycine max
Glyma.05G223800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40293131-40294130 Glycine max
Glyma.05G223800 1.0kb downstream 1.0kb downstream 1960 true Chr05: 40294131-40296090 Glycine max
Glyma.05G223800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40295091-40296090 Glycine max
Glyma.05G223800 2.0kb upstream 2.0kb upstream 2960 true Chr05: 40292131-40295090 Glycine max
Glyma.05G223800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40292131-40294130 Glycine max
Glyma.05G223800 2.0kb downstream 2.0kb downstream 2960 true Chr05: 40294131-40297090 Glycine max
Glyma.05G223800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40295091-40297090 Glycine max
Glyma.05G223800 5.0kb upstream 5.0kb upstream 5960 true Chr05: 40289131-40295090 Glycine max
Glyma.05G223800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40289131-40294130 Glycine max
Glyma.05G223800 5.0kb downstream 5.0kb downstream 5960 true Chr05: 40294131-40300090 Glycine max
Glyma.05G223800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40295091-40300090 Glycine max
Glyma.05G223800 10.0kb upstream 10.0kb upstream 10960 true Chr05: 40284131-40295090 Glycine max
Glyma.05G223800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40284131-40294130 Glycine max
Glyma.05G223800 10.0kb downstream 10.0kb downstream 10960 true Chr05: 40294131-40305090 Glycine max
Glyma.05G223800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40295091-40305090 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316001 5265 Fabidae View MSA
124071370 5270 Rosid View MSA
123744855 5271 Pentapetalae View MSA
122791825 5272 Eudicot View MSA
122042669 5273 Angiosperm View MSA
121350907 5274 Embryophyte View MSA
123424702 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 96.8818 0.0 265.847 High  
cufflinks 88.4574 0.0 241.173 High  
cufflinks 42.7541 0.0 114.086 High Low
cufflinks 50.1451 0.0 133.836 High Low
cufflinks 160.57 0.0 465.637 High High
cufflinks 150.946 0.0 434.175 High  
cufflinks 139.363 0.0 396.761 High  
cufflinks 96.9119 0.0 265.877 High  
cufflinks 119.289 0.0 333.603 High  
cufflinks 61.718     High  
cufflinks 23.905     High Low
cufflinks 47.922     High  
cufflinks 199.165     High High
cufflinks 293.2     High High
cufflinks 28.199     High Low
cufflinks 59.913     High  
cufflinks 54.322     High  
cufflinks 55.776     High  
cufflinks 73.346     High  
cufflinks 39.421     High  
cufflinks 41.109     High  
cufflinks 44.443     High  
cufflinks 64.37     High  
cufflinks 30.708     High  
cufflinks 59.451     High  
cufflinks 55.334     High  

0 Strain