Gene : Glyma.05G224200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22761//PTHR22761:SF16 - SNF7 - RELATED Genomic Order:  2242
Name:  ? Glyma.05G224200 Secondary Identifier:  ? PAC:30527147
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G224200 0.5kb upstream 0.5kb upstream 5197 true Chr05: 40306829-40312025 Glycine max
Glyma.05G224200 0.5kb upstream 0.5kb upstream 500 false Chr05: 40306829-40307328 Glycine max
Glyma.05G224200 0.5kb downstream 0.5kb downstream 5197 true Chr05: 40307329-40312525 Glycine max
Glyma.05G224200 0.5kb downstream 0.5kb downstream 500 false Chr05: 40312026-40312525 Glycine max
Glyma.05G224200 1.0kb upstream 1.0kb upstream 5697 true Chr05: 40306329-40312025 Glycine max
Glyma.05G224200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40306329-40307328 Glycine max
Glyma.05G224200 1.0kb downstream 1.0kb downstream 5697 true Chr05: 40307329-40313025 Glycine max
Glyma.05G224200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40312026-40313025 Glycine max
Glyma.05G224200 2.0kb upstream 2.0kb upstream 6697 true Chr05: 40305329-40312025 Glycine max
Glyma.05G224200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40305329-40307328 Glycine max
Glyma.05G224200 2.0kb downstream 2.0kb downstream 6697 true Chr05: 40307329-40314025 Glycine max
Glyma.05G224200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40312026-40314025 Glycine max
Glyma.05G224200 5.0kb upstream 5.0kb upstream 9697 true Chr05: 40302329-40312025 Glycine max
Glyma.05G224200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40302329-40307328 Glycine max
Glyma.05G224200 5.0kb downstream 5.0kb downstream 9697 true Chr05: 40307329-40317025 Glycine max
Glyma.05G224200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40312026-40317025 Glycine max
Glyma.05G224200 10.0kb upstream 10.0kb upstream 14697 true Chr05: 40297329-40312025 Glycine max
Glyma.05G224200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40297329-40307328 Glycine max
Glyma.05G224200 10.0kb downstream 10.0kb downstream 14697 true Chr05: 40307329-40322025 Glycine max
Glyma.05G224200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40312026-40322025 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121656542 5273 Angiosperm View MSA
122298969 5265 Fabidae View MSA
124036654 5270 Rosid View MSA
123609937 5271 Pentapetalae View MSA
122644575 5272 Eudicot View MSA
120928615 5274 Embryophyte View MSA
123426511 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.7626 0.0 74.7703    
cufflinks 18.5395 0.0 55.6808    
cufflinks 33.5944 0.0 120.381 High  
cufflinks 27.5528 0.0 82.4367 High  
cufflinks 23.8174 0.0 87.8857 High  
cufflinks 79.6806 0.0 324.88 High High
cufflinks 15.2177 0.0 55.5121   Low
cufflinks 30.7121 0.0 93.3225 High  
cufflinks 28.508 0.0 102.65 High  
cufflinks 4.041       High
cufflinks 3.533        
cufflinks 3.159        
cufflinks 2.466        
cufflinks 1.796        
cufflinks 3.129        
cufflinks 1.55       Low
cufflinks 4.858       High
cufflinks 3.339        
cufflinks 1.473       Low
cufflinks 1.612       Low
cufflinks 2.714        
cufflinks 1.605       Low
cufflinks 1.725        
cufflinks 3.514        
cufflinks 1.65       Low
cufflinks 3.871       High

0 Strain