Gene : Glyma.05G226900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21068:SF5 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MIL23-RELATED Genomic Order:  2269
Name:  ? Glyma.05G226900 Secondary Identifier:  ? PAC:30527405
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G226900 0.5kb upstream 0.5kb upstream 3069 true Chr05: 40515595-40518663 Glycine max
Glyma.05G226900 0.5kb upstream 0.5kb upstream 500 false Chr05: 40515595-40516094 Glycine max
Glyma.05G226900 0.5kb downstream 0.5kb downstream 3069 true Chr05: 40516095-40519163 Glycine max
Glyma.05G226900 0.5kb downstream 0.5kb downstream 500 false Chr05: 40518664-40519163 Glycine max
Glyma.05G226900 1.0kb upstream 1.0kb upstream 3569 true Chr05: 40515095-40518663 Glycine max
Glyma.05G226900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40515095-40516094 Glycine max
Glyma.05G226900 1.0kb downstream 1.0kb downstream 3569 true Chr05: 40516095-40519663 Glycine max
Glyma.05G226900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40518664-40519663 Glycine max
Glyma.05G226900 2.0kb upstream 2.0kb upstream 4569 true Chr05: 40514095-40518663 Glycine max
Glyma.05G226900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40514095-40516094 Glycine max
Glyma.05G226900 2.0kb downstream 2.0kb downstream 4569 true Chr05: 40516095-40520663 Glycine max
Glyma.05G226900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40518664-40520663 Glycine max
Glyma.05G226900 5.0kb upstream 5.0kb upstream 7569 true Chr05: 40511095-40518663 Glycine max
Glyma.05G226900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40511095-40516094 Glycine max
Glyma.05G226900 5.0kb downstream 5.0kb downstream 7569 true Chr05: 40516095-40523663 Glycine max
Glyma.05G226900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40518664-40523663 Glycine max
Glyma.05G226900 10.0kb upstream 10.0kb upstream 12569 true Chr05: 40506095-40518663 Glycine max
Glyma.05G226900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40506095-40516094 Glycine max
Glyma.05G226900 10.0kb downstream 10.0kb downstream 12569 true Chr05: 40516095-40528663 Glycine max
Glyma.05G226900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40518664-40528663 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026413 5273 Angiosperm View MSA
122309272 5265 Fabidae View MSA
124068163 5270 Rosid View MSA
123740247 5271 Pentapetalae View MSA
122787553 5272 Eudicot View MSA
121296318 5274 Embryophyte View MSA
123334500 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0901373 0.0 0.358786 Low Low
cufflinks 0.73375 0.0 2.65927    
cufflinks 0.589276 0.0 2.15955    
cufflinks 0.32943 0.0 1.24342    
cufflinks 1.63131 0.0 5.53619    
cufflinks 0.357067 0.0 1.34368    
cufflinks 0.707304 0.0 2.56952    
cufflinks 10.4338 0.0 28.2933   High
cufflinks 1.53049 0.0 5.22497    
cufflinks 0.262        
cufflinks 0.143        
cufflinks 0.322        
cufflinks 0.178        
cufflinks 0.156        
cufflinks 0.028     Low Low
cufflinks 0.111        
cufflinks 0.96       High
cufflinks 0.551       High
cufflinks 0.549       High
cufflinks 0.177        
cufflinks 0.277        
cufflinks 0.195        
cufflinks 0.361        
cufflinks 0.197        
cufflinks 0.164        
cufflinks 0.458        

0 Strain