Gene : Glyma.05G227200 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11945:SF229 - F23H11.23 PROTEIN-RELATED Genomic Order:  2272
Name:  ? Glyma.05G227200 Secondary Identifier:  ? PAC:30527046
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G227200 0.5kb upstream 0.5kb upstream 1367 true Chr05: 40541038-40542404 Glycine max
Glyma.05G227200 0.5kb upstream 0.5kb upstream 500 false Chr05: 40541038-40541537 Glycine max
Glyma.05G227200 0.5kb downstream 0.5kb downstream 1367 true Chr05: 40541538-40542904 Glycine max
Glyma.05G227200 0.5kb downstream 0.5kb downstream 500 false Chr05: 40542405-40542904 Glycine max
Glyma.05G227200 1.0kb upstream 1.0kb upstream 1867 true Chr05: 40540538-40542404 Glycine max
Glyma.05G227200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40540538-40541537 Glycine max
Glyma.05G227200 1.0kb downstream 1.0kb downstream 1867 true Chr05: 40541538-40543404 Glycine max
Glyma.05G227200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40542405-40543404 Glycine max
Glyma.05G227200 2.0kb upstream 2.0kb upstream 2867 true Chr05: 40539538-40542404 Glycine max
Glyma.05G227200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40539538-40541537 Glycine max
Glyma.05G227200 2.0kb downstream 2.0kb downstream 2867 true Chr05: 40541538-40544404 Glycine max
Glyma.05G227200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40542405-40544404 Glycine max
Glyma.05G227200 5.0kb upstream 5.0kb upstream 5867 true Chr05: 40536538-40542404 Glycine max
Glyma.05G227200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40536538-40541537 Glycine max
Glyma.05G227200 5.0kb downstream 5.0kb downstream 5867 true Chr05: 40541538-40547404 Glycine max
Glyma.05G227200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40542405-40547404 Glycine max
Glyma.05G227200 10.0kb upstream 10.0kb upstream 10867 true Chr05: 40531538-40542404 Glycine max
Glyma.05G227200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40531538-40541537 Glycine max
Glyma.05G227200 10.0kb downstream 10.0kb downstream 10867 true Chr05: 40541538-40552404 Glycine max
Glyma.05G227200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40542405-40552404 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311335 5265 Fabidae View MSA
124050462 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.309011 0.0 1.21112    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.34581 0.0 1.35036    
cufflinks 1.10974 0.0 4.11965   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.435204 0.0 1.68335    
cufflinks 0.116        
cufflinks 1.145        
cufflinks 0.066     Low  
cufflinks 1.59       High
cufflinks 0.28        
cufflinks 0.064        
cufflinks 0.043     Low Low
cufflinks 1.569       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.456        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.389        
cufflinks 0.022     Low Low
cufflinks 4.635       High

0 Strain