Gene : Glyma.05G227300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11945:SF229 - F23H11.23 PROTEIN-RELATED Genomic Order:  2273
Name:  ? Glyma.05G227300 Secondary Identifier:  ? PAC:30527145
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G227300 0.5kb upstream 0.5kb upstream 1034 true Chr05: 40555105-40556138 Glycine max
Glyma.05G227300 0.5kb upstream 0.5kb upstream 500 false Chr05: 40555639-40556138 Glycine max
Glyma.05G227300 0.5kb downstream 0.5kb downstream 1034 true Chr05: 40554605-40555638 Glycine max
Glyma.05G227300 0.5kb downstream 0.5kb downstream 500 false Chr05: 40554605-40555104 Glycine max
Glyma.05G227300 1.0kb upstream 1.0kb upstream 1534 true Chr05: 40555105-40556638 Glycine max
Glyma.05G227300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40555639-40556638 Glycine max
Glyma.05G227300 1.0kb downstream 1.0kb downstream 1534 true Chr05: 40554105-40555638 Glycine max
Glyma.05G227300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40554105-40555104 Glycine max
Glyma.05G227300 2.0kb upstream 2.0kb upstream 2534 true Chr05: 40555105-40557638 Glycine max
Glyma.05G227300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40555639-40557638 Glycine max
Glyma.05G227300 2.0kb downstream 2.0kb downstream 2534 true Chr05: 40553105-40555638 Glycine max
Glyma.05G227300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40553105-40555104 Glycine max
Glyma.05G227300 5.0kb upstream 5.0kb upstream 5534 true Chr05: 40555105-40560638 Glycine max
Glyma.05G227300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40555639-40560638 Glycine max
Glyma.05G227300 5.0kb downstream 5.0kb downstream 5534 true Chr05: 40550105-40555638 Glycine max
Glyma.05G227300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40550105-40555104 Glycine max
Glyma.05G227300 10.0kb upstream 10.0kb upstream 10534 true Chr05: 40555105-40565638 Glycine max
Glyma.05G227300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40555639-40565638 Glycine max
Glyma.05G227300 10.0kb downstream 10.0kb downstream 10534 true Chr05: 40545105-40555638 Glycine max
Glyma.05G227300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40545105-40555104 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311335 5265 Fabidae View MSA
124050462 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.237401 0.0 0.957362    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0248702 0.0 0.119577 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.172       High
cufflinks 0.061     Low  
cufflinks 0.023     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low  
cufflinks 0.034     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.039     Low  
cufflinks 0.138       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.081        

0 Strain