Gene : Glyma.05G228200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11062:SF84 - EXOSTOSIN FAMILY PROTEIN Genomic Order:  2282
Name:  ? Glyma.05G228200 Secondary Identifier:  ? PAC:30524903
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5980 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G228200 0.5kb upstream 0.5kb upstream 4290 true Chr05: 40631232-40635521 Glycine max
Glyma.05G228200 0.5kb upstream 0.5kb upstream 500 false Chr05: 40635022-40635521 Glycine max
Glyma.05G228200 0.5kb downstream 0.5kb downstream 4290 true Chr05: 40630732-40635021 Glycine max
Glyma.05G228200 0.5kb downstream 0.5kb downstream 500 false Chr05: 40630732-40631231 Glycine max
Glyma.05G228200 1.0kb upstream 1.0kb upstream 4790 true Chr05: 40631232-40636021 Glycine max
Glyma.05G228200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40635022-40636021 Glycine max
Glyma.05G228200 1.0kb downstream 1.0kb downstream 4790 true Chr05: 40630232-40635021 Glycine max
Glyma.05G228200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40630232-40631231 Glycine max
Glyma.05G228200 2.0kb upstream 2.0kb upstream 5790 true Chr05: 40631232-40637021 Glycine max
Glyma.05G228200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40635022-40637021 Glycine max
Glyma.05G228200 2.0kb downstream 2.0kb downstream 5790 true Chr05: 40629232-40635021 Glycine max
Glyma.05G228200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40629232-40631231 Glycine max
Glyma.05G228200 5.0kb upstream 5.0kb upstream 8790 true Chr05: 40631232-40640021 Glycine max
Glyma.05G228200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40635022-40640021 Glycine max
Glyma.05G228200 5.0kb downstream 5.0kb downstream 8790 true Chr05: 40626232-40635021 Glycine max
Glyma.05G228200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40626232-40631231 Glycine max
Glyma.05G228200 10.0kb upstream 10.0kb upstream 13790 true Chr05: 40631232-40645021 Glycine max
Glyma.05G228200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40635022-40645021 Glycine max
Glyma.05G228200 10.0kb downstream 10.0kb downstream 13790 true Chr05: 40621232-40635021 Glycine max
Glyma.05G228200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40621232-40631231 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304821 5265 Fabidae View MSA
124063167 5270 Rosid View MSA
123741138 5271 Pentapetalae View MSA
122789943 5272 Eudicot View MSA
122046187 5273 Angiosperm View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.81626 0.0 13.1028    
cufflinks 2.48765 0.0 9.70484    
cufflinks 1.24926 0.0 4.46905   Low
cufflinks 5.97207 0.0 21.5231    
cufflinks 4.71763 0.0 15.9623    
cufflinks 2.27645 0.0 9.11814    
cufflinks 10.9671 0.0 37.3711   High
cufflinks 8.73196 0.0 30.131   High
cufflinks 5.87179 0.0 18.42    
cufflinks 2.292       High
cufflinks 0.136       Low
cufflinks 0.766        
cufflinks 1.855        
cufflinks 2.264       High
cufflinks 1.057        
cufflinks 1.006        
cufflinks 0.553        
cufflinks 1.628        
cufflinks 1.01        
cufflinks 1.115        
cufflinks 0.312       Low
cufflinks 1.382        
cufflinks 1.026        
cufflinks 0.22       Low
cufflinks 1.111        
cufflinks 0.274       Low

0 Strain