Gene : Glyma.05G217800 G. max Wm82.a2.v1
Defline:  (1 of 1) PF00097//PF00628 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // PHD-finger (PHD) Genomic Order:  2178
Name:  ? Glyma.05G217800 Secondary Identifier:  ? PAC:30526248
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G217800 0.5kb upstream 0.5kb upstream 10882 true Chr05: 39780008-39790889 Glycine max
Glyma.05G217800 0.5kb upstream 0.5kb upstream 500 false Chr05: 39780008-39780507 Glycine max
Glyma.05G217800 0.5kb downstream 0.5kb downstream 10882 true Chr05: 39780508-39791389 Glycine max
Glyma.05G217800 0.5kb downstream 0.5kb downstream 500 false Chr05: 39790890-39791389 Glycine max
Glyma.05G217800 1.0kb upstream 1.0kb upstream 11382 true Chr05: 39779508-39790889 Glycine max
Glyma.05G217800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39779508-39780507 Glycine max
Glyma.05G217800 1.0kb downstream 1.0kb downstream 11382 true Chr05: 39780508-39791889 Glycine max
Glyma.05G217800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39790890-39791889 Glycine max
Glyma.05G217800 2.0kb upstream 2.0kb upstream 12382 true Chr05: 39778508-39790889 Glycine max
Glyma.05G217800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39778508-39780507 Glycine max
Glyma.05G217800 2.0kb downstream 2.0kb downstream 12382 true Chr05: 39780508-39792889 Glycine max
Glyma.05G217800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39790890-39792889 Glycine max
Glyma.05G217800 5.0kb upstream 5.0kb upstream 15382 true Chr05: 39775508-39790889 Glycine max
Glyma.05G217800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39775508-39780507 Glycine max
Glyma.05G217800 5.0kb downstream 5.0kb downstream 15382 true Chr05: 39780508-39795889 Glycine max
Glyma.05G217800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39790890-39795889 Glycine max
Glyma.05G217800 10.0kb upstream 10.0kb upstream 20382 true Chr05: 39770508-39790889 Glycine max
Glyma.05G217800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39770508-39780507 Glycine max
Glyma.05G217800 10.0kb downstream 10.0kb downstream 20382 true Chr05: 39780508-39800889 Glycine max
Glyma.05G217800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39790890-39800889 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305898 5265 Fabidae View MSA
124061818 5270 Rosid View MSA
123737188 5271 Pentapetalae View MSA
122794309 5272 Eudicot View MSA
122043530 5273 Angiosperm View MSA
121343947 5274 Embryophyte View MSA
123379945 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.1747 0.0 13.8565    
cufflinks 3.06732 0.0 13.5087    
cufflinks 3.70997 0.0 15.862   High
cufflinks 2.74979 0.0 11.2804    
cufflinks 2.72674 0.0 12.3949    
cufflinks 2.5965 0.0 11.8271   Low
cufflinks 3.41995 0.0 14.8748   High
cufflinks 2.48712 0.0 10.495   Low
cufflinks 2.95759 0.0 12.0675    
cufflinks 0.278        
cufflinks 0.201       Low
cufflinks 0.318        
cufflinks 0.3        
cufflinks 0.312        
cufflinks 0.488       High
cufflinks 0.477       High
cufflinks 0.198       Low
cufflinks 0.398        
cufflinks 0.419        
cufflinks 0.49       High
cufflinks 0.253       Low
cufflinks 0.475       High
cufflinks 0.406        
cufflinks 0.32        
cufflinks 0.463        
cufflinks 0.284        

0 Strain