Gene : Glyma.05G219800 G. max Wm82.a2.v1
Defline:  (1 of 1) 3.2.1.28 - Alpha,alpha-trehalase / Trehalase Genomic Order:  2198
Name:  ? Glyma.05G219800 Secondary Identifier:  ? PAC:30525236
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G219800 0.5kb upstream 0.5kb upstream 5533 true Chr05: 39919683-39925215 Glycine max
Glyma.05G219800 0.5kb upstream 0.5kb upstream 500 false Chr05: 39919683-39920182 Glycine max
Glyma.05G219800 0.5kb downstream 0.5kb downstream 5533 true Chr05: 39920183-39925715 Glycine max
Glyma.05G219800 0.5kb downstream 0.5kb downstream 500 false Chr05: 39925216-39925715 Glycine max
Glyma.05G219800 1.0kb upstream 1.0kb upstream 6033 true Chr05: 39919183-39925215 Glycine max
Glyma.05G219800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39919183-39920182 Glycine max
Glyma.05G219800 1.0kb downstream 1.0kb downstream 6033 true Chr05: 39920183-39926215 Glycine max
Glyma.05G219800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39925216-39926215 Glycine max
Glyma.05G219800 2.0kb upstream 2.0kb upstream 7033 true Chr05: 39918183-39925215 Glycine max
Glyma.05G219800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39918183-39920182 Glycine max
Glyma.05G219800 2.0kb downstream 2.0kb downstream 7033 true Chr05: 39920183-39927215 Glycine max
Glyma.05G219800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39925216-39927215 Glycine max
Glyma.05G219800 5.0kb upstream 5.0kb upstream 10033 true Chr05: 39915183-39925215 Glycine max
Glyma.05G219800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39915183-39920182 Glycine max
Glyma.05G219800 5.0kb downstream 5.0kb downstream 10033 true Chr05: 39920183-39930215 Glycine max
Glyma.05G219800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39925216-39930215 Glycine max
Glyma.05G219800 10.0kb upstream 10.0kb upstream 15033 true Chr05: 39910183-39925215 Glycine max
Glyma.05G219800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39910183-39920182 Glycine max
Glyma.05G219800 10.0kb downstream 10.0kb downstream 15033 true Chr05: 39920183-39935215 Glycine max
Glyma.05G219800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39925216-39935215 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302738 5265 Fabidae View MSA
124068038 5270 Rosid View MSA
123743670 5271 Pentapetalae View MSA
122788986 5272 Eudicot View MSA
122046703 5273 Angiosperm View MSA
121347864 5274 Embryophyte View MSA
123424777 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.1604 0.0 41.9734    
cufflinks 7.36581 0.0 26.2115    
cufflinks 6.00834 0.0 19.0984    
cufflinks 13.6734 0.0 41.6621    
cufflinks 11.644 0.0 35.6387    
cufflinks 2.93307 0.0 11.0957   Low
cufflinks 3.82892 0.0 13.4665   Low
cufflinks 10.4555 0.0 35.9203    
cufflinks 17.3663 0.0 53.8523   High
cufflinks 2.515        
cufflinks 0.621       Low
cufflinks 2.414        
cufflinks 2.235        
cufflinks 2.516        
cufflinks 4.835       High
cufflinks 1.395        
cufflinks 1.074        
cufflinks 3.431       High
cufflinks 2.132        
cufflinks 1.146        
cufflinks 0.899       Low
cufflinks 1.483        
cufflinks 1.487        
cufflinks 0.91       Low
cufflinks 1.09        
cufflinks 1.206        

0 Strain