Gene : Glyma.05G220300 G. max Wm82.a2.v1
Defline:  (1 of 10) PF14604 - Variant SH3 domain (SH3_9) Genomic Order:  2203
Name:  ? Glyma.05G220300 Secondary Identifier:  ? PAC:30527246
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G220300 0.5kb upstream 0.5kb upstream 17125 true Chr05: 39973535-39990659 Glycine max
Glyma.05G220300 0.5kb upstream 0.5kb upstream 500 false Chr05: 39973535-39974034 Glycine max
Glyma.05G220300 0.5kb downstream 0.5kb downstream 17125 true Chr05: 39974035-39991159 Glycine max
Glyma.05G220300 0.5kb downstream 0.5kb downstream 500 false Chr05: 39990660-39991159 Glycine max
Glyma.05G220300 1.0kb upstream 1.0kb upstream 17625 true Chr05: 39973035-39990659 Glycine max
Glyma.05G220300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39973035-39974034 Glycine max
Glyma.05G220300 1.0kb downstream 1.0kb downstream 17625 true Chr05: 39974035-39991659 Glycine max
Glyma.05G220300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39990660-39991659 Glycine max
Glyma.05G220300 2.0kb upstream 2.0kb upstream 18625 true Chr05: 39972035-39990659 Glycine max
Glyma.05G220300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39972035-39974034 Glycine max
Glyma.05G220300 2.0kb downstream 2.0kb downstream 18625 true Chr05: 39974035-39992659 Glycine max
Glyma.05G220300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39990660-39992659 Glycine max
Glyma.05G220300 5.0kb upstream 5.0kb upstream 21625 true Chr05: 39969035-39990659 Glycine max
Glyma.05G220300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39969035-39974034 Glycine max
Glyma.05G220300 5.0kb downstream 5.0kb downstream 21625 true Chr05: 39974035-39995659 Glycine max
Glyma.05G220300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39990660-39995659 Glycine max
Glyma.05G220300 10.0kb upstream 10.0kb upstream 26625 true Chr05: 39964035-39990659 Glycine max
Glyma.05G220300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39964035-39974034 Glycine max
Glyma.05G220300 10.0kb downstream 10.0kb downstream 26625 true Chr05: 39974035-40000659 Glycine max
Glyma.05G220300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39990660-40000659 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309070 5265 Fabidae View MSA
124068619 5270 Rosid View MSA
123739982 5271 Pentapetalae View MSA
122785695 5272 Eudicot View MSA
122044130 5273 Angiosperm View MSA
121348962 5274 Embryophyte View MSA
123428583 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.47977 0.0 12.1076   Low
cufflinks 5.62391 0.0 15.0632    
cufflinks 5.61098 0.0 15.0175    
cufflinks 9.03925 0.0 24.1662   High
cufflinks 8.87306 0.0 23.7109   High
cufflinks 4.7385 0.0 12.7682   Low
cufflinks 6.67295 0.0 17.8147    
cufflinks 7.20639 0.0 19.2262    
cufflinks 8.56735 0.0 22.8824   High
cufflinks 2.671       High
cufflinks 1.315       Low
cufflinks 1.562        
cufflinks 2.597       High
cufflinks 3.305       High
cufflinks 2.712       High
cufflinks 1.73        
cufflinks 1.579        
cufflinks 2.19        
cufflinks 2.28        
cufflinks 1.434        
cufflinks 1.683        
cufflinks 1.651        
cufflinks 1.763        
cufflinks 1.53        
cufflinks 1.486        
cufflinks 1.43        

0 Strain