Gene : Glyma.05G222000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10457:SF11 - GALACTURONOKINASE Genomic Order:  2220
Name:  ? Glyma.05G222000 Secondary Identifier:  ? PAC:30526623
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-4 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G222000 0.5kb upstream 0.5kb upstream 12625 true Chr05: 40144859-40157483 Glycine max
Glyma.05G222000 0.5kb upstream 0.5kb upstream 500 false Chr05: 40144859-40145358 Glycine max
Glyma.05G222000 0.5kb downstream 0.5kb downstream 12625 true Chr05: 40145359-40157983 Glycine max
Glyma.05G222000 0.5kb downstream 0.5kb downstream 500 false Chr05: 40157484-40157983 Glycine max
Glyma.05G222000 1.0kb upstream 1.0kb upstream 13125 true Chr05: 40144359-40157483 Glycine max
Glyma.05G222000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40144359-40145358 Glycine max
Glyma.05G222000 1.0kb downstream 1.0kb downstream 13125 true Chr05: 40145359-40158483 Glycine max
Glyma.05G222000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40157484-40158483 Glycine max
Glyma.05G222000 2.0kb upstream 2.0kb upstream 14125 true Chr05: 40143359-40157483 Glycine max
Glyma.05G222000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40143359-40145358 Glycine max
Glyma.05G222000 2.0kb downstream 2.0kb downstream 14125 true Chr05: 40145359-40159483 Glycine max
Glyma.05G222000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40157484-40159483 Glycine max
Glyma.05G222000 5.0kb upstream 5.0kb upstream 17125 true Chr05: 40140359-40157483 Glycine max
Glyma.05G222000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40140359-40145358 Glycine max
Glyma.05G222000 5.0kb downstream 5.0kb downstream 17125 true Chr05: 40145359-40162483 Glycine max
Glyma.05G222000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40157484-40162483 Glycine max
Glyma.05G222000 10.0kb upstream 10.0kb upstream 22125 true Chr05: 40135359-40157483 Glycine max
Glyma.05G222000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40135359-40145358 Glycine max
Glyma.05G222000 10.0kb downstream 10.0kb downstream 22125 true Chr05: 40145359-40167483 Glycine max
Glyma.05G222000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40157484-40167483 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305467 5265 Fabidae View MSA
124050204 5270 Rosid View MSA
123740556 5271 Pentapetalae View MSA
122789142 5272 Eudicot View MSA
122041803 5273 Angiosperm View MSA
121344936 5274 Embryophyte View MSA
123425309 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.5688 0.0 47.1725    
cufflinks 3.65636 0.0 14.9725   Low
cufflinks 9.2194 0.0 30.0453    
cufflinks 55.0086 0.0 190.795 High High
cufflinks 17.316 0.0 52.2054    
cufflinks 25.1753 0.0 78.5709 High  
cufflinks 23.0005 0.0 70.7413 High  
cufflinks 46.314 0.0 153.055 High High
cufflinks 16.4465 0.0 56.6534    
cufflinks 1.013        
cufflinks 1.424       High
cufflinks 0.729        
cufflinks 1.071        
cufflinks 1.138        
cufflinks 1.091        
cufflinks 0.32       Low
cufflinks 0.667        
cufflinks 0.922        
cufflinks 0.703        
cufflinks 0.765        
cufflinks 1.338        
cufflinks 0.44       Low
cufflinks 0.633        
cufflinks 1.758       High
cufflinks 0.521       Low
cufflinks 1.841       High

0 Strain