Gene : Glyma.05G222300 G. max Wm82.a2.v1
Defline:  (1 of 4) 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase Genomic Order:  2223
Name:  ? Glyma.05G222300 Secondary Identifier:  ? PAC:30523652
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6556 Glycine max pathologic  
Gmax PWY-7193 Glycine max pathologic  
Gmax PWY-7196 Glycine max pathologic  
Gmax PWY-7199 Glycine max pathologic  
Gmax PWY-7200 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G222300 0.5kb upstream 0.5kb upstream 2023 true Chr05: 40171876-40173898 Glycine max
Glyma.05G222300 0.5kb upstream 0.5kb upstream 500 false Chr05: 40173399-40173898 Glycine max
Glyma.05G222300 0.5kb downstream 0.5kb downstream 2023 true Chr05: 40171376-40173398 Glycine max
Glyma.05G222300 0.5kb downstream 0.5kb downstream 500 false Chr05: 40171376-40171875 Glycine max
Glyma.05G222300 1.0kb upstream 1.0kb upstream 2523 true Chr05: 40171876-40174398 Glycine max
Glyma.05G222300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40173399-40174398 Glycine max
Glyma.05G222300 1.0kb downstream 1.0kb downstream 2523 true Chr05: 40170876-40173398 Glycine max
Glyma.05G222300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40170876-40171875 Glycine max
Glyma.05G222300 2.0kb upstream 2.0kb upstream 3523 true Chr05: 40171876-40175398 Glycine max
Glyma.05G222300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40173399-40175398 Glycine max
Glyma.05G222300 2.0kb downstream 2.0kb downstream 3523 true Chr05: 40169876-40173398 Glycine max
Glyma.05G222300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40169876-40171875 Glycine max
Glyma.05G222300 5.0kb upstream 5.0kb upstream 6523 true Chr05: 40171876-40178398 Glycine max
Glyma.05G222300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40173399-40178398 Glycine max
Glyma.05G222300 5.0kb downstream 5.0kb downstream 6523 true Chr05: 40166876-40173398 Glycine max
Glyma.05G222300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40166876-40171875 Glycine max
Glyma.05G222300 10.0kb upstream 10.0kb upstream 11523 true Chr05: 40171876-40183398 Glycine max
Glyma.05G222300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40173399-40183398 Glycine max
Glyma.05G222300 10.0kb downstream 10.0kb downstream 11523 true Chr05: 40161876-40173398 Glycine max
Glyma.05G222300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40161876-40171875 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306341 5265 Fabidae View MSA
124068161 5270 Rosid View MSA
123744425 5271 Pentapetalae View MSA
122793352 5272 Eudicot View MSA
122048037 5273 Angiosperm View MSA
121343942 5274 Embryophyte View MSA
123424852 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.74618 0.0 11.9149    
cufflinks 5.04205 0.0 15.4543    
cufflinks 12.2386 0.0 33.8779    
cufflinks 9.1754 0.0 25.9954    
cufflinks 10.8681 0.0 30.0283    
cufflinks 9.90554 0.0 27.6532    
cufflinks 0.982827 0.0 3.56698   Low
cufflinks 4.40318 0.0 13.7271    
cufflinks 11.6631 0.0 32.1752    
cufflinks 3.418        
cufflinks 3.616        
cufflinks 4.164        
cufflinks 7.636     High  
cufflinks 2.983        
cufflinks 1.66        
cufflinks 1.004       Low
cufflinks 48.816     High High
cufflinks 2.878        
cufflinks 4.007        
cufflinks 1.02       Low
cufflinks 3.109        
cufflinks 0.863       Low
cufflinks 1.168        
cufflinks 3.336        
cufflinks 0.892       Low
cufflinks 17.081     High High

0 Strain