Gene : Glyma.06G012200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12565//PTHR12565:SF149 - STEROL REGULATORY ELEMENT-BINDING PROTEIN Genomic Order:  122
Name:  ? Glyma.06G012200 Secondary Identifier:  ? PAC:30553885
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G012200 0.5kb upstream 0.5kb upstream 3014 true Chr06: 900351-903364 Glycine max
Glyma.06G012200 0.5kb upstream 0.5kb upstream 500 false Chr06: 902865-903364 Glycine max
Glyma.06G012200 0.5kb downstream 0.5kb downstream 3014 true Chr06: 899851-902864 Glycine max
Glyma.06G012200 0.5kb downstream 0.5kb downstream 500 false Chr06: 899851-900350 Glycine max
Glyma.06G012200 1.0kb upstream 1.0kb upstream 3514 true Chr06: 900351-903864 Glycine max
Glyma.06G012200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 902865-903864 Glycine max
Glyma.06G012200 1.0kb downstream 1.0kb downstream 3514 true Chr06: 899351-902864 Glycine max
Glyma.06G012200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 899351-900350 Glycine max
Glyma.06G012200 2.0kb upstream 2.0kb upstream 4514 true Chr06: 900351-904864 Glycine max
Glyma.06G012200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 902865-904864 Glycine max
Glyma.06G012200 2.0kb downstream 2.0kb downstream 4514 true Chr06: 898351-902864 Glycine max
Glyma.06G012200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 898351-900350 Glycine max
Glyma.06G012200 5.0kb upstream 5.0kb upstream 7514 true Chr06: 900351-907864 Glycine max
Glyma.06G012200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 902865-907864 Glycine max
Glyma.06G012200 5.0kb downstream 5.0kb downstream 7514 true Chr06: 895351-902864 Glycine max
Glyma.06G012200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 895351-900350 Glycine max
Glyma.06G012200 10.0kb upstream 10.0kb upstream 12514 true Chr06: 900351-912864 Glycine max
Glyma.06G012200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 902865-912864 Glycine max
Glyma.06G012200 10.0kb downstream 10.0kb downstream 12514 true Chr06: 890351-902864 Glycine max
Glyma.06G012200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 890351-900350 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310623 5265 Fabidae View MSA
124065885 5270 Rosid View MSA
123741744 5271 Pentapetalae View MSA
122786731 5272 Eudicot View MSA
122048155 5273 Angiosperm View MSA
121350038 5274 Embryophyte View MSA
123381551 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.9126 0.0 50.9226   High
cufflinks 13.3836 0.0 45.8933   High
cufflinks 1.83037 0.0 8.77703   Low
cufflinks 9.3759 0.0 33.374    
cufflinks 8.65096 0.0 31.5516    
cufflinks 2.8368 0.0 12.0264   Low
cufflinks 3.79812 0.0 14.6467    
cufflinks 7.27946 0.0 23.2912    
cufflinks 5.72916 0.0 19.3959    
cufflinks 1.334        
cufflinks 0.19       Low
cufflinks 1.449        
cufflinks 1.213        
cufflinks 0.434        
cufflinks 0.229       Low
cufflinks 6.835       High
cufflinks 0.199       Low
cufflinks 3.908        
cufflinks 2.671        
cufflinks 8.513     High High
cufflinks 0.265       Low
cufflinks 6.781       High
cufflinks 5.048        
cufflinks 0.278       Low
cufflinks 7.793     High High
cufflinks 0.323        

0 Strain