Gene : Glyma.06G014600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31500:SF0 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Genomic Order:  146
Name:  ? Glyma.06G014600 Secondary Identifier:  ? PAC:30553925
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G014600 0.5kb upstream 0.5kb upstream 4657 true Chr06: 1097286-1101942 Glycine max
Glyma.06G014600 0.5kb upstream 0.5kb upstream 500 false Chr06: 1097286-1097785 Glycine max
Glyma.06G014600 0.5kb downstream 0.5kb downstream 4657 true Chr06: 1097786-1102442 Glycine max
Glyma.06G014600 0.5kb downstream 0.5kb downstream 500 false Chr06: 1101943-1102442 Glycine max
Glyma.06G014600 1.0kb upstream 1.0kb upstream 5157 true Chr06: 1096786-1101942 Glycine max
Glyma.06G014600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1096786-1097785 Glycine max
Glyma.06G014600 1.0kb downstream 1.0kb downstream 5157 true Chr06: 1097786-1102942 Glycine max
Glyma.06G014600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1101943-1102942 Glycine max
Glyma.06G014600 2.0kb upstream 2.0kb upstream 6157 true Chr06: 1095786-1101942 Glycine max
Glyma.06G014600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1095786-1097785 Glycine max
Glyma.06G014600 2.0kb downstream 2.0kb downstream 6157 true Chr06: 1097786-1103942 Glycine max
Glyma.06G014600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1101943-1103942 Glycine max
Glyma.06G014600 5.0kb upstream 5.0kb upstream 9157 true Chr06: 1092786-1101942 Glycine max
Glyma.06G014600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1092786-1097785 Glycine max
Glyma.06G014600 5.0kb downstream 5.0kb downstream 9157 true Chr06: 1097786-1106942 Glycine max
Glyma.06G014600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1101943-1106942 Glycine max
Glyma.06G014600 10.0kb upstream 10.0kb upstream 14157 true Chr06: 1087786-1101942 Glycine max
Glyma.06G014600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1087786-1097785 Glycine max
Glyma.06G014600 10.0kb downstream 10.0kb downstream 14157 true Chr06: 1097786-1111942 Glycine max
Glyma.06G014600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1101943-1111942 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304333 5265 Fabidae View MSA
124069070 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.75004 0.0 31.1868    
cufflinks 20.9153 0.0 74.5062 High  
cufflinks 24.4693 0.0 93.0416 High High
cufflinks 17.5263 0.0 59.5342    
cufflinks 9.30429 0.0 32.9711    
cufflinks 5.74006 0.0 22.0986   Low
cufflinks 14.1269 0.0 49.6276    
cufflinks 15.3586 0.0 51.988    
cufflinks 13.7067 0.0 47.6897    
cufflinks 2.04        
cufflinks 5.949     High High
cufflinks 3.235        
cufflinks 0.689       Low
cufflinks 0.559       Low
cufflinks 6.493     High High
cufflinks 3.099        
cufflinks 1.166       Low
cufflinks 1.16       Low
cufflinks 4.022        
cufflinks 2.568        
cufflinks 6.475     High High
cufflinks 2.954        
cufflinks 4.36        
cufflinks 4.238        
cufflinks 2.502        
cufflinks 2.844        

0 Strain