Gene : Glyma.06G015400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21049:SF1 - DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 1A Genomic Order:  154
Name:  ? Glyma.06G015400 Secondary Identifier:  ? PAC:30552491
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G015400 0.5kb upstream 0.5kb upstream 4988 true Chr06: 1147523-1152510 Glycine max
Glyma.06G015400 0.5kb upstream 0.5kb upstream 500 false Chr06: 1152011-1152510 Glycine max
Glyma.06G015400 0.5kb downstream 0.5kb downstream 4988 true Chr06: 1147023-1152010 Glycine max
Glyma.06G015400 0.5kb downstream 0.5kb downstream 500 false Chr06: 1147023-1147522 Glycine max
Glyma.06G015400 1.0kb upstream 1.0kb upstream 5488 true Chr06: 1147523-1153010 Glycine max
Glyma.06G015400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1152011-1153010 Glycine max
Glyma.06G015400 1.0kb downstream 1.0kb downstream 5488 true Chr06: 1146523-1152010 Glycine max
Glyma.06G015400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1146523-1147522 Glycine max
Glyma.06G015400 2.0kb upstream 2.0kb upstream 6488 true Chr06: 1147523-1154010 Glycine max
Glyma.06G015400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1152011-1154010 Glycine max
Glyma.06G015400 2.0kb downstream 2.0kb downstream 6488 true Chr06: 1145523-1152010 Glycine max
Glyma.06G015400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1145523-1147522 Glycine max
Glyma.06G015400 5.0kb upstream 5.0kb upstream 9488 true Chr06: 1147523-1157010 Glycine max
Glyma.06G015400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1152011-1157010 Glycine max
Glyma.06G015400 5.0kb downstream 5.0kb downstream 9488 true Chr06: 1142523-1152010 Glycine max
Glyma.06G015400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1142523-1147522 Glycine max
Glyma.06G015400 10.0kb upstream 10.0kb upstream 14488 true Chr06: 1147523-1162010 Glycine max
Glyma.06G015400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1152011-1162010 Glycine max
Glyma.06G015400 10.0kb downstream 10.0kb downstream 14488 true Chr06: 1137523-1152010 Glycine max
Glyma.06G015400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1137523-1147522 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308076 5265 Fabidae View MSA
124068967 5270 Rosid View MSA
123737223 5271 Pentapetalae View MSA
122791942 5272 Eudicot View MSA
122045839 5273 Angiosperm View MSA
121344517 5274 Embryophyte View MSA
123425585 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.8576 0.0 101.491 High  
cufflinks 33.0792 0.0 124.729 High  
cufflinks 23.3981 0.0 83.135 High Low
cufflinks 41.8458 0.0 168.385 High  
cufflinks 41.2307 0.0 164.023 High  
cufflinks 33.247 0.0 125.872 High  
cufflinks 61.5185 0.0 238.008 High High
cufflinks 32.1513 0.0 121.098 High  
cufflinks 36.1567 0.0 139.75 High  
cufflinks 11.711     High  
cufflinks 4.304       Low
cufflinks 9.561     High  
cufflinks 15.84     High High
cufflinks 18.148     High High
cufflinks 3.544       Low
cufflinks 8.813     High  
cufflinks 5.755        
cufflinks 13.042     High High
cufflinks 11.559     High  
cufflinks 7.772     High  
cufflinks 6.697     High  
cufflinks 8.265     High  
cufflinks 9.415     High  
cufflinks 6.696     High  
cufflinks 7.808     High  
cufflinks 6.981     High  

0 Strain