Gene : Glyma.06G017400 G. max Wm82.a2.v1
Defline:  (1 of 9) PF13704 - Glycosyl transferase family 2 (Glyco_tranf_2_4) Genomic Order:  174
Name:  ? Glyma.06G017400 Secondary Identifier:  ? PAC:30550654
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G017400 0.5kb upstream 0.5kb upstream 2258 true Chr06: 1284619-1286876 Glycine max
Glyma.06G017400 0.5kb upstream 0.5kb upstream 500 false Chr06: 1286377-1286876 Glycine max
Glyma.06G017400 0.5kb downstream 0.5kb downstream 2258 true Chr06: 1284119-1286376 Glycine max
Glyma.06G017400 0.5kb downstream 0.5kb downstream 500 false Chr06: 1284119-1284618 Glycine max
Glyma.06G017400 1.0kb upstream 1.0kb upstream 2758 true Chr06: 1284619-1287376 Glycine max
Glyma.06G017400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1286377-1287376 Glycine max
Glyma.06G017400 1.0kb downstream 1.0kb downstream 2758 true Chr06: 1283619-1286376 Glycine max
Glyma.06G017400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1283619-1284618 Glycine max
Glyma.06G017400 2.0kb upstream 2.0kb upstream 3758 true Chr06: 1284619-1288376 Glycine max
Glyma.06G017400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1286377-1288376 Glycine max
Glyma.06G017400 2.0kb downstream 2.0kb downstream 3758 true Chr06: 1282619-1286376 Glycine max
Glyma.06G017400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1282619-1284618 Glycine max
Glyma.06G017400 5.0kb upstream 5.0kb upstream 6758 true Chr06: 1284619-1291376 Glycine max
Glyma.06G017400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1286377-1291376 Glycine max
Glyma.06G017400 5.0kb downstream 5.0kb downstream 6758 true Chr06: 1279619-1286376 Glycine max
Glyma.06G017400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1279619-1284618 Glycine max
Glyma.06G017400 10.0kb upstream 10.0kb upstream 11758 true Chr06: 1284619-1296376 Glycine max
Glyma.06G017400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1286377-1296376 Glycine max
Glyma.06G017400 10.0kb downstream 10.0kb downstream 11758 true Chr06: 1274619-1286376 Glycine max
Glyma.06G017400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1274619-1284618 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306640 5265 Fabidae View MSA
124063187 5270 Rosid View MSA
123747908 5271 Pentapetalae View MSA
122796800 5272 Eudicot View MSA
122042100 5273 Angiosperm View MSA
123428981 5275 Viridiplantae View MSA
121349408 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.100682 0.0 0.399263 Low  
cufflinks 17.7095 0.0 47.2706   High
cufflinks 0.161452 0.0 0.629169 Low  
cufflinks 0.61046 0.0 2.22837    
cufflinks 13.2734 0.0 35.6035   High
cufflinks 0.0743568 0.0 0.297437 Low  
cufflinks 0.388474 0.0 1.45546    
cufflinks 0.275156 0.0 1.04648    
cufflinks 1.282        
cufflinks 1.199        
cufflinks 5.487       High
cufflinks 1.218        
cufflinks 0.39        
cufflinks 0.677        
cufflinks 0.784        
cufflinks 0.989        
cufflinks 1.026        
cufflinks 0.185       Low
cufflinks 0.663        
cufflinks 0.625        
cufflinks 0.667        
cufflinks 0.469        
cufflinks 0.21       Low
cufflinks 0.481        
cufflinks 0.72        

0 Strain