Gene : Glyma.06G003900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11913:SF16 - ACTIN-DEPOLYMERIZING FACTOR 5-RELATED Genomic Order:  39
Name:  ? Glyma.06G003900 Secondary Identifier:  ? PAC:30553314
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G003900 0.5kb upstream 0.5kb upstream 1755 true Chr06: 363328-365082 Glycine max
Glyma.06G003900 0.5kb upstream 0.5kb upstream 500 false Chr06: 364583-365082 Glycine max
Glyma.06G003900 0.5kb downstream 0.5kb downstream 1755 true Chr06: 362828-364582 Glycine max
Glyma.06G003900 0.5kb downstream 0.5kb downstream 500 false Chr06: 362828-363327 Glycine max
Glyma.06G003900 1.0kb upstream 1.0kb upstream 2255 true Chr06: 363328-365582 Glycine max
Glyma.06G003900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 364583-365582 Glycine max
Glyma.06G003900 1.0kb downstream 1.0kb downstream 2255 true Chr06: 362328-364582 Glycine max
Glyma.06G003900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 362328-363327 Glycine max
Glyma.06G003900 2.0kb upstream 2.0kb upstream 3255 true Chr06: 363328-366582 Glycine max
Glyma.06G003900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 364583-366582 Glycine max
Glyma.06G003900 2.0kb downstream 2.0kb downstream 3255 true Chr06: 361328-364582 Glycine max
Glyma.06G003900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 361328-363327 Glycine max
Glyma.06G003900 5.0kb upstream 5.0kb upstream 6255 true Chr06: 363328-369582 Glycine max
Glyma.06G003900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 364583-369582 Glycine max
Glyma.06G003900 5.0kb downstream 5.0kb downstream 6255 true Chr06: 358328-364582 Glycine max
Glyma.06G003900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 358328-363327 Glycine max
Glyma.06G003900 10.0kb upstream 10.0kb upstream 11255 true Chr06: 363328-374582 Glycine max
Glyma.06G003900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 364583-374582 Glycine max
Glyma.06G003900 10.0kb downstream 10.0kb downstream 11255 true Chr06: 353328-364582 Glycine max
Glyma.06G003900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 353328-363327 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254650 5265 Fabidae View MSA
123996716 5270 Rosid View MSA
123571139 5271 Pentapetalae View MSA
122795975 5272 Eudicot View MSA
122046307 5273 Angiosperm View MSA
121310587 5274 Embryophyte View MSA
123348034 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.910663 0.0 7.84577   Low
cufflinks 22.1837 0.0 102.956 High  
cufflinks 10.7463 0.0 55.2251    
cufflinks 19.7296 0.0 89.2182    
cufflinks 24.9897 0.0 105.088 High  
cufflinks 23.3742 0.0 101.476 High  
cufflinks 15.8812 0.0 77.5367    
cufflinks 25.2421 0.0 107.329 High  
cufflinks 15.2138 0.0 65.5002    
cufflinks 10.442     High High
cufflinks 3.518        
cufflinks 5.261        
cufflinks 12.341     High High
cufflinks 9.681     High High
cufflinks 1.977        
cufflinks 2.566        
cufflinks 2.001        
cufflinks 3.329        
cufflinks 10.413     High High
cufflinks 1.92        
cufflinks 8.563     High  
cufflinks 1.566       Low
cufflinks 1.078       Low
cufflinks 2.87        
cufflinks 2.153        
cufflinks 8.134     High  

0 Strain