Gene : Glyma.06G004400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31490:SF3 - GLYCOSYL HYDROLASE FAMILY 10 PROTEIN Genomic Order:  44
Name:  ? Glyma.06G004400 Secondary Identifier:  ? PAC:30549826
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G004400 0.5kb upstream 0.5kb upstream 3893 true Chr06: 380473-384365 Glycine max
Glyma.06G004400 0.5kb upstream 0.5kb upstream 500 false Chr06: 380473-380972 Glycine max
Glyma.06G004400 0.5kb downstream 0.5kb downstream 3893 true Chr06: 380973-384865 Glycine max
Glyma.06G004400 0.5kb downstream 0.5kb downstream 500 false Chr06: 384366-384865 Glycine max
Glyma.06G004400 1.0kb upstream 1.0kb upstream 4393 true Chr06: 379973-384365 Glycine max
Glyma.06G004400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 379973-380972 Glycine max
Glyma.06G004400 1.0kb downstream 1.0kb downstream 4393 true Chr06: 380973-385365 Glycine max
Glyma.06G004400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 384366-385365 Glycine max
Glyma.06G004400 2.0kb upstream 2.0kb upstream 5393 true Chr06: 378973-384365 Glycine max
Glyma.06G004400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 378973-380972 Glycine max
Glyma.06G004400 2.0kb downstream 2.0kb downstream 5393 true Chr06: 380973-386365 Glycine max
Glyma.06G004400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 384366-386365 Glycine max
Glyma.06G004400 5.0kb upstream 5.0kb upstream 8393 true Chr06: 375973-384365 Glycine max
Glyma.06G004400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 375973-380972 Glycine max
Glyma.06G004400 5.0kb downstream 5.0kb downstream 8393 true Chr06: 380973-389365 Glycine max
Glyma.06G004400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 384366-389365 Glycine max
Glyma.06G004400 10.0kb upstream 10.0kb upstream 13393 true Chr06: 370973-384365 Glycine max
Glyma.06G004400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 370973-380972 Glycine max
Glyma.06G004400 10.0kb downstream 10.0kb downstream 13393 true Chr06: 380973-394365 Glycine max
Glyma.06G004400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 384366-394365 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306431 5265 Fabidae View MSA
124067450 5270 Rosid View MSA
123751912 5271 Pentapetalae View MSA
122790761 5272 Eudicot View MSA
122050145 5273 Angiosperm View MSA
121311762 5274 Embryophyte View MSA
123426707 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0313404 0.0 0.129722 Low Low
cufflinks 4.70786 0.0 13.4686    
cufflinks 2.46129 0.0 7.65808    
cufflinks 32.4471 0.0 89.2785 High High
cufflinks 0.427499 0.0 1.57982    
cufflinks 0.83436 0.0 2.9542    
cufflinks 59.7505 0.0 176.226 High High
cufflinks 1.85776 0.0 6.02331    
cufflinks 2.1519 0.0 6.8453    
cufflinks 1.479        
cufflinks 0.012     Low Low
cufflinks 2.865       High
cufflinks 0.033     Low Low
cufflinks 0.152        
cufflinks 0.319        
cufflinks 1.319        
cufflinks 0.178        
cufflinks 3.308       High
cufflinks 4.979       High
cufflinks 0.629        
cufflinks 0.025     Low Low
cufflinks 0.872        
cufflinks 1.332        
cufflinks 0.017     Low Low
cufflinks 0.773        
cufflinks 0.04     Low Low

0 Strain