Gene : Glyma.06G004900 G. max Wm82.a2.v1
Defline:  (1 of 43) PF01190 - Pollen proteins Ole e I like (Pollen_Ole_e_I) Genomic Order:  49
Name:  ? Glyma.06G004900 Secondary Identifier:  ? PAC:30551506
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G004900 0.5kb upstream 0.5kb upstream 2888 true Chr06: 419216-422103 Glycine max
Glyma.06G004900 0.5kb upstream 0.5kb upstream 500 false Chr06: 421604-422103 Glycine max
Glyma.06G004900 0.5kb downstream 0.5kb downstream 2888 true Chr06: 418716-421603 Glycine max
Glyma.06G004900 0.5kb downstream 0.5kb downstream 500 false Chr06: 418716-419215 Glycine max
Glyma.06G004900 1.0kb upstream 1.0kb upstream 3388 true Chr06: 419216-422603 Glycine max
Glyma.06G004900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 421604-422603 Glycine max
Glyma.06G004900 1.0kb downstream 1.0kb downstream 3388 true Chr06: 418216-421603 Glycine max
Glyma.06G004900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 418216-419215 Glycine max
Glyma.06G004900 2.0kb upstream 2.0kb upstream 4388 true Chr06: 419216-423603 Glycine max
Glyma.06G004900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 421604-423603 Glycine max
Glyma.06G004900 2.0kb downstream 2.0kb downstream 4388 true Chr06: 417216-421603 Glycine max
Glyma.06G004900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 417216-419215 Glycine max
Glyma.06G004900 5.0kb upstream 5.0kb upstream 7388 true Chr06: 419216-426603 Glycine max
Glyma.06G004900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 421604-426603 Glycine max
Glyma.06G004900 5.0kb downstream 5.0kb downstream 7388 true Chr06: 414216-421603 Glycine max
Glyma.06G004900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 414216-419215 Glycine max
Glyma.06G004900 10.0kb upstream 10.0kb upstream 12388 true Chr06: 419216-431603 Glycine max
Glyma.06G004900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 421604-431603 Glycine max
Glyma.06G004900 10.0kb downstream 10.0kb downstream 12388 true Chr06: 409216-421603 Glycine max
Glyma.06G004900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 409216-419215 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302393 5265 Fabidae View MSA
124061296 5270 Rosid View MSA
123747098 5271 Pentapetalae View MSA
122793338 5272 Eudicot View MSA
122042133 5273 Angiosperm View MSA
121349082 5274 Embryophyte View MSA
123381156 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.81653 0.0 6.30315    
cufflinks 6.85221 0.0 20.029    
cufflinks 2.46739 0.0 8.28136    
cufflinks 7.1544 0.0 20.7241    
cufflinks 1.8735 0.0 6.47234    
cufflinks 14.8872 0.0 40.3383   High
cufflinks 0.53104 0.0 1.98995    
cufflinks 6.82046 0.0 19.8751    
cufflinks 0.0177591 0.0 0.0803241 Low Low
cufflinks 7.284        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.351        
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.522        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 7.39     High  
cufflinks 5.465        
cufflinks 3.57        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 6.029        
cufflinks 5.135        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.622        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain