Gene : Glyma.06G008500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23002//PTHR23002:SF65 - ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN Genomic Order:  85
Name:  ? Glyma.06G008500 Secondary Identifier:  ? PAC:30553905
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G008500 0.5kb upstream 0.5kb upstream 5796 true Chr06: 658745-664540 Glycine max
Glyma.06G008500 0.5kb upstream 0.5kb upstream 500 false Chr06: 664041-664540 Glycine max
Glyma.06G008500 0.5kb downstream 0.5kb downstream 5796 true Chr06: 658245-664040 Glycine max
Glyma.06G008500 0.5kb downstream 0.5kb downstream 500 false Chr06: 658245-658744 Glycine max
Glyma.06G008500 1.0kb upstream 1.0kb upstream 6296 true Chr06: 658745-665040 Glycine max
Glyma.06G008500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 664041-665040 Glycine max
Glyma.06G008500 1.0kb downstream 1.0kb downstream 6296 true Chr06: 657745-664040 Glycine max
Glyma.06G008500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 657745-658744 Glycine max
Glyma.06G008500 2.0kb upstream 2.0kb upstream 7296 true Chr06: 658745-666040 Glycine max
Glyma.06G008500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 664041-666040 Glycine max
Glyma.06G008500 2.0kb downstream 2.0kb downstream 7296 true Chr06: 656745-664040 Glycine max
Glyma.06G008500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 656745-658744 Glycine max
Glyma.06G008500 5.0kb upstream 5.0kb upstream 10296 true Chr06: 658745-669040 Glycine max
Glyma.06G008500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 664041-669040 Glycine max
Glyma.06G008500 5.0kb downstream 5.0kb downstream 10296 true Chr06: 653745-664040 Glycine max
Glyma.06G008500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 653745-658744 Glycine max
Glyma.06G008500 10.0kb upstream 10.0kb upstream 15296 true Chr06: 658745-674040 Glycine max
Glyma.06G008500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 664041-674040 Glycine max
Glyma.06G008500 10.0kb downstream 10.0kb downstream 15296 true Chr06: 648745-664040 Glycine max
Glyma.06G008500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 648745-658744 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302384 5265 Fabidae View MSA
124072720 5270 Rosid View MSA
123746430 5271 Pentapetalae View MSA
122796601 5272 Eudicot View MSA
122046078 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121350985 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.1074 0.0 60.1552    
cufflinks 17.4954 0.0 52.6052    
cufflinks 17.5378 0.0 52.5846    
cufflinks 13.2597 0.0 40.7503   Low
cufflinks 23.4454 0.0 69.4537 High High
cufflinks 24.3255 0.0 71.9514 High High
cufflinks 19.5667 0.0 58.3638    
cufflinks 15.4503 0.0 46.7689    
cufflinks 18.8831 0.0 55.9351    
cufflinks 4.799       Low
cufflinks 7.47     High High
cufflinks 6.339        
cufflinks 6.332        
cufflinks 8.106     High High
cufflinks 6.526     High  
cufflinks 6.776        
cufflinks 5.291       Low
cufflinks 5.517       Low
cufflinks 6.885        
cufflinks 6.023        
cufflinks 5.986     High  
cufflinks 6.647        
cufflinks 6.582        
cufflinks 6.065        
cufflinks 6.582        
cufflinks 5.498       Low

0 Strain