Gene : Glyma.05G248000 G. max Wm82.a2.v1
Defline:  (1 of 27) PTHR10502 - ANNEXIN Genomic Order:  2480
Name:  ? Glyma.05G248000 Secondary Identifier:  ? PAC:30523755
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G248000 0.5kb upstream 0.5kb upstream 3686 true Chr05: 42113952-42117637 Glycine max
Glyma.05G248000 0.5kb upstream 0.5kb upstream 500 false Chr05: 42117138-42117637 Glycine max
Glyma.05G248000 0.5kb downstream 0.5kb downstream 3686 true Chr05: 42113452-42117137 Glycine max
Glyma.05G248000 0.5kb downstream 0.5kb downstream 500 false Chr05: 42113452-42113951 Glycine max
Glyma.05G248000 1.0kb upstream 1.0kb upstream 4186 true Chr05: 42113952-42118137 Glycine max
Glyma.05G248000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 42117138-42118137 Glycine max
Glyma.05G248000 1.0kb downstream 1.0kb downstream 4186 true Chr05: 42112952-42117137 Glycine max
Glyma.05G248000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 42112952-42113951 Glycine max
Glyma.05G248000 2.0kb upstream 2.0kb upstream 5186 true Chr05: 42113952-42119137 Glycine max
Glyma.05G248000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 42117138-42119137 Glycine max
Glyma.05G248000 2.0kb downstream 2.0kb downstream 5186 true Chr05: 42111952-42117137 Glycine max
Glyma.05G248000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 42111952-42113951 Glycine max
Glyma.05G248000 5.0kb upstream 5.0kb upstream 8186 true Chr05: 42113952-42122137 Glycine max
Glyma.05G248000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 42117138-42122137 Glycine max
Glyma.05G248000 5.0kb downstream 5.0kb downstream 8186 true Chr05: 42108952-42117137 Glycine max
Glyma.05G248000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 42108952-42113951 Glycine max
Glyma.05G248000 10.0kb upstream 10.0kb upstream 13186 true Chr05: 42113952-42127137 Glycine max
Glyma.05G248000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 42117138-42127137 Glycine max
Glyma.05G248000 10.0kb downstream 10.0kb downstream 13186 true Chr05: 42103952-42117137 Glycine max
Glyma.05G248000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 42103952-42113951 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122237802 5265 Fabidae Singleton cluster - no MSA
123983315 5270 Rosid Singleton cluster - no MSA
123748887 5271 Pentapetalae View MSA
122772873 5272 Eudicot View MSA
122049634 5273 Angiosperm View MSA
121311514 5274 Embryophyte View MSA
123348801 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.515372 0.0 1.96396    
cufflinks 0.884299 0.0 3.28776    
cufflinks 0.85576 0.0 3.18154    
cufflinks 1.10517 0.0 4.05563    
cufflinks 0.148508 0.0 0.594626 Low Low
cufflinks 0.230328 0.0 0.907378 Low  
cufflinks 2.74918 0.0 9.46621   High
cufflinks 0.970004 0.0 3.58863    
cufflinks 0.122547 0.0 0.494218 Low Low
cufflinks 0.263        
cufflinks 0.147        
cufflinks 0.312       High
cufflinks 0.065     Low Low
cufflinks 0.101        
cufflinks 0.135        
cufflinks 0.255        
cufflinks 0.086        
cufflinks 0.19        
cufflinks 0.372       High
cufflinks 0.26        
cufflinks 0.099        
cufflinks 0.182        
cufflinks 0.066     Low Low
cufflinks 0.073       Low
cufflinks 0.287       High
cufflinks 0.077       Low

0 Strain