Gene : Glyma.05G249100 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR22731//PTHR22731:SF9 - RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 Genomic Order:  2491
Name:  ? Glyma.05G249100 Secondary Identifier:  ? PAC:30526690
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G249100 0.5kb upstream 0.5kb upstream 4113 true Chr05: 42230319-42234431 Glycine max
Glyma.05G249100 0.5kb upstream 0.5kb upstream 500 false Chr05: 42230319-42230818 Glycine max
Glyma.05G249100 0.5kb downstream 0.5kb downstream 3680 true Chr05: 42230819-42234498 Glycine max
Glyma.05G249100 0.5kb downstream 0.5kb downstream 67 false Chr05: 42234432-42234498 Glycine max
Glyma.05G249100 1.0kb upstream 1.0kb upstream 4613 true Chr05: 42229819-42234431 Glycine max
Glyma.05G249100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 42229819-42230818 Glycine max
Glyma.05G249100 1.0kb downstream 1.0kb downstream 3680 true Chr05: 42230819-42234498 Glycine max
Glyma.05G249100 1.0kb downstream 1.0kb downstream 67 false Chr05: 42234432-42234498 Glycine max
Glyma.05G249100 2.0kb upstream 2.0kb upstream 5613 true Chr05: 42228819-42234431 Glycine max
Glyma.05G249100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 42228819-42230818 Glycine max
Glyma.05G249100 2.0kb downstream 2.0kb downstream 3680 true Chr05: 42230819-42234498 Glycine max
Glyma.05G249100 2.0kb downstream 2.0kb downstream 67 false Chr05: 42234432-42234498 Glycine max
Glyma.05G249100 5.0kb upstream 5.0kb upstream 8613 true Chr05: 42225819-42234431 Glycine max
Glyma.05G249100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 42225819-42230818 Glycine max
Glyma.05G249100 5.0kb downstream 5.0kb downstream 3680 true Chr05: 42230819-42234498 Glycine max
Glyma.05G249100 5.0kb downstream 5.0kb downstream 67 false Chr05: 42234432-42234498 Glycine max
Glyma.05G249100 10.0kb upstream 10.0kb upstream 13613 true Chr05: 42220819-42234431 Glycine max
Glyma.05G249100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 42220819-42230818 Glycine max
Glyma.05G249100 10.0kb downstream 10.0kb downstream 3680 true Chr05: 42230819-42234498 Glycine max
Glyma.05G249100 10.0kb downstream 10.0kb downstream 67 false Chr05: 42234432-42234498 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121615379 5273 Angiosperm View MSA
122250252 5265 Fabidae View MSA
123993516 5270 Rosid View MSA
123568283 5271 Pentapetalae View MSA
122603029 5272 Eudicot View MSA
120887573 5274 Embryophyte View MSA
122928327 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.56725 0.0 11.5249    
cufflinks 0.999713 0.0 9.81187    
cufflinks 0.82436 0.0 6.5506   Low
cufflinks 1.0392 0.0 8.12729    
cufflinks 1.066 0.0 10.2871    
cufflinks 1.72591 0.0 11.8792   High
cufflinks 1.98936 0.0 11.3247   High
cufflinks 0.666584 0.0 6.55113   Low
cufflinks 1.49539 0.0 10.4537    
cufflinks 0.021     Low Low
cufflinks 0.051     Low  
cufflinks 0.063     Low  
cufflinks 0.046     Low  
cufflinks 0.022     Low Low
cufflinks 0.164       High
cufflinks 0.048     Low  
cufflinks 0.035     Low  
cufflinks 0.071     Low  
cufflinks 0.049     Low  
cufflinks 0.028     Low Low
cufflinks 0.065        
cufflinks 0.048     Low  
cufflinks 0.048     Low  
cufflinks 0.04     Low  
cufflinks 0.034     Low  
cufflinks 0.054     Low  

0 Strain