Gene : Glyma.06G000400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32002:SF3 - PROTEIN NLP1-RELATED Genomic Order:  4
Name:  ? Glyma.06G000400 Secondary Identifier:  ? PAC:30552112
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G000400 0.5kb upstream 0.5kb upstream 3769 true Chr06: 46421-50189 Glycine max
Glyma.06G000400 0.5kb upstream 0.5kb upstream 500 false Chr06: 49690-50189 Glycine max
Glyma.06G000400 0.5kb downstream 0.5kb downstream 3769 true Chr06: 45921-49689 Glycine max
Glyma.06G000400 0.5kb downstream 0.5kb downstream 500 false Chr06: 45921-46420 Glycine max
Glyma.06G000400 1.0kb upstream 1.0kb upstream 4269 true Chr06: 46421-50689 Glycine max
Glyma.06G000400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 49690-50689 Glycine max
Glyma.06G000400 1.0kb downstream 1.0kb downstream 4269 true Chr06: 45421-49689 Glycine max
Glyma.06G000400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 45421-46420 Glycine max
Glyma.06G000400 2.0kb upstream 2.0kb upstream 5269 true Chr06: 46421-51689 Glycine max
Glyma.06G000400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 49690-51689 Glycine max
Glyma.06G000400 2.0kb downstream 2.0kb downstream 5269 true Chr06: 44421-49689 Glycine max
Glyma.06G000400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 44421-46420 Glycine max
Glyma.06G000400 5.0kb upstream 5.0kb upstream 8269 true Chr06: 46421-54689 Glycine max
Glyma.06G000400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 49690-54689 Glycine max
Glyma.06G000400 5.0kb downstream 5.0kb downstream 8269 true Chr06: 41421-49689 Glycine max
Glyma.06G000400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 41421-46420 Glycine max
Glyma.06G000400 10.0kb upstream 10.0kb upstream 13269 true Chr06: 46421-59689 Glycine max
Glyma.06G000400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 49690-59689 Glycine max
Glyma.06G000400 10.0kb downstream 10.0kb downstream 13269 true Chr06: 36421-49689 Glycine max
Glyma.06G000400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 36421-46420 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316146 5265 Fabidae View MSA
124051219 5270 Rosid View MSA
123748880 5271 Pentapetalae View MSA
122772868 5272 Eudicot View MSA
122051349 5273 Angiosperm View MSA
121350940 5274 Embryophyte View MSA
123428170 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.116453 0.0 0.449118 Low  
cufflinks 0.00721152 0.0 0.0327044 Low Low
cufflinks 0.083356 0.0 0.326003 Low  
cufflinks 0.260231 0.0 0.96852    
cufflinks 4.45495 0.0 12.3401   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.031867 0.0 0.129266 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 16.8975 0.0 45.5857   High
cufflinks 0.048     Low  
cufflinks 0.006     Low  
cufflinks 0.121        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 11.934     High High
cufflinks 0.006     Low  
cufflinks 0.011     Low  
cufflinks 0.069     Low  
cufflinks 0.034     Low  
cufflinks 0.01     Low  
cufflinks 0.008     Low  
cufflinks 0.05     Low  
cufflinks 0.021     Low  
cufflinks 0.011     Low  
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain