Gene : Glyma.05G242700 G. max Wm82.a2.v1
Defline:  (1 of 3) 3.6.4.9 - Chaperonin ATPase / Chaperonin Genomic Order:  2427
Name:  ? Glyma.05G242700 Secondary Identifier:  ? PAC:30524341
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G242700 0.5kb upstream 0.5kb upstream 2841 true Chr05: 41760764-41763604 Glycine max
Glyma.05G242700 0.5kb upstream 0.5kb upstream 500 false Chr05: 41763105-41763604 Glycine max
Glyma.05G242700 0.5kb downstream 0.5kb downstream 2841 true Chr05: 41760264-41763104 Glycine max
Glyma.05G242700 0.5kb downstream 0.5kb downstream 500 false Chr05: 41760264-41760763 Glycine max
Glyma.05G242700 1.0kb upstream 1.0kb upstream 3341 true Chr05: 41760764-41764104 Glycine max
Glyma.05G242700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 41763105-41764104 Glycine max
Glyma.05G242700 1.0kb downstream 1.0kb downstream 3341 true Chr05: 41759764-41763104 Glycine max
Glyma.05G242700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 41759764-41760763 Glycine max
Glyma.05G242700 2.0kb upstream 2.0kb upstream 4341 true Chr05: 41760764-41765104 Glycine max
Glyma.05G242700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 41763105-41765104 Glycine max
Glyma.05G242700 2.0kb downstream 2.0kb downstream 4341 true Chr05: 41758764-41763104 Glycine max
Glyma.05G242700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 41758764-41760763 Glycine max
Glyma.05G242700 5.0kb upstream 5.0kb upstream 7341 true Chr05: 41760764-41768104 Glycine max
Glyma.05G242700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 41763105-41768104 Glycine max
Glyma.05G242700 5.0kb downstream 5.0kb downstream 7341 true Chr05: 41755764-41763104 Glycine max
Glyma.05G242700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 41755764-41760763 Glycine max
Glyma.05G242700 10.0kb upstream 10.0kb upstream 12341 true Chr05: 41760764-41773104 Glycine max
Glyma.05G242700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 41763105-41773104 Glycine max
Glyma.05G242700 10.0kb downstream 10.0kb downstream 12341 true Chr05: 41750764-41763104 Glycine max
Glyma.05G242700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 41750764-41760763 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041248 5273 Angiosperm View MSA
122305362 5265 Fabidae View MSA
124061732 5270 Rosid View MSA
123744760 5271 Pentapetalae View MSA
122793416 5272 Eudicot View MSA
121345664 5274 Embryophyte View MSA
123424288 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.449 0.0 22.8149   Low
cufflinks 17.7506 0.0 47.4863    
cufflinks 9.68395 0.0 26.0375   Low
cufflinks 17.7696 0.0 47.5362    
cufflinks 26.5327 0.0 72.5849 High High
cufflinks 10.439 0.0 27.9511    
cufflinks 22.8462 0.0 61.8325 High High
cufflinks 18.1323 0.0 48.5525    
cufflinks 14.3739 0.0 38.3531    
cufflinks 13.777     High  
cufflinks 1.34       Low
cufflinks 10.957     High  
cufflinks 22.257     High High
cufflinks 30.231     High High
cufflinks 1.525       Low
cufflinks 8.221     High  
cufflinks 4.632        
cufflinks 11.033     High  
cufflinks 21.403     High High
cufflinks 5.321        
cufflinks 2.605       Low
cufflinks 7.1        
cufflinks 11.133     High  
cufflinks 1.893       Low
cufflinks 6.47        
cufflinks 4.472        

0 Strain