Gene : Glyma.05G245100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR13937 - EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED Genomic Order:  2451
Name:  ? Glyma.05G245100 Secondary Identifier:  ? PAC:30526058
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G245100 0.5kb upstream 0.5kb upstream 4874 true Chr05: 41916780-41921653 Glycine max
Glyma.05G245100 0.5kb upstream 0.5kb upstream 500 false Chr05: 41921154-41921653 Glycine max
Glyma.05G245100 0.5kb downstream 0.5kb downstream 4874 true Chr05: 41916280-41921153 Glycine max
Glyma.05G245100 0.5kb downstream 0.5kb downstream 500 false Chr05: 41916280-41916779 Glycine max
Glyma.05G245100 1.0kb upstream 1.0kb upstream 5374 true Chr05: 41916780-41922153 Glycine max
Glyma.05G245100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 41921154-41922153 Glycine max
Glyma.05G245100 1.0kb downstream 1.0kb downstream 5374 true Chr05: 41915780-41921153 Glycine max
Glyma.05G245100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 41915780-41916779 Glycine max
Glyma.05G245100 2.0kb upstream 2.0kb upstream 6374 true Chr05: 41916780-41923153 Glycine max
Glyma.05G245100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 41921154-41923153 Glycine max
Glyma.05G245100 2.0kb downstream 2.0kb downstream 6374 true Chr05: 41914780-41921153 Glycine max
Glyma.05G245100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 41914780-41916779 Glycine max
Glyma.05G245100 5.0kb upstream 5.0kb upstream 9374 true Chr05: 41916780-41926153 Glycine max
Glyma.05G245100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 41921154-41926153 Glycine max
Glyma.05G245100 5.0kb downstream 5.0kb downstream 9374 true Chr05: 41911780-41921153 Glycine max
Glyma.05G245100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 41911780-41916779 Glycine max
Glyma.05G245100 10.0kb upstream 10.0kb upstream 14374 true Chr05: 41916780-41931153 Glycine max
Glyma.05G245100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 41921154-41931153 Glycine max
Glyma.05G245100 10.0kb downstream 10.0kb downstream 14374 true Chr05: 41906780-41921153 Glycine max
Glyma.05G245100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 41906780-41916779 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305110 5265 Fabidae View MSA
124064059 5270 Rosid View MSA
123748906 5271 Pentapetalae View MSA
122796222 5272 Eudicot View MSA
122042650 5273 Angiosperm View MSA
121345410 5274 Embryophyte View MSA
123424846 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.37493 0.0 22.3433    
cufflinks 9.54282 0.0 25.474    
cufflinks 6.13629 0.0 16.4449   Low
cufflinks 9.3112 0.0 24.8567    
cufflinks 15.1103 0.0 41.0633   High
cufflinks 8.35248 0.0 22.2836    
cufflinks 17.0122 0.0 46.6051   High
cufflinks 10.5809 0.0 28.3086    
cufflinks 10.7221 0.0 28.6897    
cufflinks 8.345     High  
cufflinks 3.135       Low
cufflinks 8.994     High  
cufflinks 17.358     High High
cufflinks 22.519     High High
cufflinks 5.47     High  
cufflinks 8.08     High  
cufflinks 5.672        
cufflinks 9.185     High  
cufflinks 13.824     High High
cufflinks 6.758        
cufflinks 4.615        
cufflinks 7.736     High  
cufflinks 10.589     High  
cufflinks 3.633       Low
cufflinks 7.742     High  
cufflinks 5.785        

0 Strain