Gene : Glyma.05G245200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10516:SF308 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-2, CHLOROPLASTIC-RELATED Genomic Order:  2452
Name:  ? Glyma.05G245200 Secondary Identifier:  ? PAC:30526983
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G245200 0.5kb upstream 0.5kb upstream 2713 true Chr05: 41922174-41924886 Glycine max
Glyma.05G245200 0.5kb upstream 0.5kb upstream 500 false Chr05: 41924387-41924886 Glycine max
Glyma.05G245200 0.5kb downstream 0.5kb downstream 2713 true Chr05: 41921674-41924386 Glycine max
Glyma.05G245200 0.5kb downstream 0.5kb downstream 500 false Chr05: 41921674-41922173 Glycine max
Glyma.05G245200 1.0kb upstream 1.0kb upstream 3213 true Chr05: 41922174-41925386 Glycine max
Glyma.05G245200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 41924387-41925386 Glycine max
Glyma.05G245200 1.0kb downstream 1.0kb downstream 3213 true Chr05: 41921174-41924386 Glycine max
Glyma.05G245200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 41921174-41922173 Glycine max
Glyma.05G245200 2.0kb upstream 2.0kb upstream 4213 true Chr05: 41922174-41926386 Glycine max
Glyma.05G245200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 41924387-41926386 Glycine max
Glyma.05G245200 2.0kb downstream 2.0kb downstream 4213 true Chr05: 41920174-41924386 Glycine max
Glyma.05G245200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 41920174-41922173 Glycine max
Glyma.05G245200 5.0kb upstream 5.0kb upstream 7213 true Chr05: 41922174-41929386 Glycine max
Glyma.05G245200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 41924387-41929386 Glycine max
Glyma.05G245200 5.0kb downstream 5.0kb downstream 7213 true Chr05: 41917174-41924386 Glycine max
Glyma.05G245200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 41917174-41922173 Glycine max
Glyma.05G245200 10.0kb upstream 10.0kb upstream 12213 true Chr05: 41922174-41934386 Glycine max
Glyma.05G245200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 41924387-41934386 Glycine max
Glyma.05G245200 10.0kb downstream 10.0kb downstream 12213 true Chr05: 41912174-41924386 Glycine max
Glyma.05G245200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 41912174-41922173 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041293 5273 Angiosperm View MSA
122300132 5265 Fabidae View MSA
124068387 5270 Rosid View MSA
123740147 5271 Pentapetalae View MSA
122793412 5272 Eudicot View MSA
121344596 5274 Embryophyte View MSA
123424769 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.4667 0.0 70.62 High High
cufflinks 14.1626 0.0 38.6411   High
cufflinks 4.28637 0.0 13.4072    
cufflinks 6.07147 0.0 18.1179    
cufflinks 1.5254 0.0 5.4028    
cufflinks 1.17239 0.0 4.22992    
cufflinks 5.48162 0.0 16.6083    
cufflinks 4.88516 0.0 14.9952    
cufflinks 0.409713 0.0 1.55823   Low
cufflinks 4.357        
cufflinks 0.227        
cufflinks 3.182        
cufflinks 0.058     Low Low
cufflinks 0.151        
cufflinks 0.094       Low
cufflinks 20.558     High High
cufflinks 0.142        
cufflinks 5.705        
cufflinks 4.443        
cufflinks 37.066     High High
cufflinks 0.144        
cufflinks 30.341     High High
cufflinks 24.125     High High
cufflinks 0.182        
cufflinks 25.631     High High
cufflinks 0.099       Low

0 Strain