Gene : Glyma.05G246600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14513 - PROTECTION OF TELOMERES 1 Genomic Order:  2466
Name:  ? Glyma.05G246600 Secondary Identifier:  ? PAC:30524238
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G246600 0.5kb upstream 0.5kb upstream 4418 true Chr05: 42013962-42018379 Glycine max
Glyma.05G246600 0.5kb upstream 0.5kb upstream 500 false Chr05: 42013962-42014461 Glycine max
Glyma.05G246600 0.5kb downstream 0.5kb downstream 4418 true Chr05: 42014462-42018879 Glycine max
Glyma.05G246600 0.5kb downstream 0.5kb downstream 500 false Chr05: 42018380-42018879 Glycine max
Glyma.05G246600 1.0kb upstream 1.0kb upstream 4918 true Chr05: 42013462-42018379 Glycine max
Glyma.05G246600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 42013462-42014461 Glycine max
Glyma.05G246600 1.0kb downstream 1.0kb downstream 4918 true Chr05: 42014462-42019379 Glycine max
Glyma.05G246600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 42018380-42019379 Glycine max
Glyma.05G246600 2.0kb upstream 2.0kb upstream 5918 true Chr05: 42012462-42018379 Glycine max
Glyma.05G246600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 42012462-42014461 Glycine max
Glyma.05G246600 2.0kb downstream 2.0kb downstream 5918 true Chr05: 42014462-42020379 Glycine max
Glyma.05G246600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 42018380-42020379 Glycine max
Glyma.05G246600 5.0kb upstream 5.0kb upstream 8918 true Chr05: 42009462-42018379 Glycine max
Glyma.05G246600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 42009462-42014461 Glycine max
Glyma.05G246600 5.0kb downstream 5.0kb downstream 8918 true Chr05: 42014462-42023379 Glycine max
Glyma.05G246600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 42018380-42023379 Glycine max
Glyma.05G246600 10.0kb upstream 10.0kb upstream 13918 true Chr05: 42004462-42018379 Glycine max
Glyma.05G246600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 42004462-42014461 Glycine max
Glyma.05G246600 10.0kb downstream 10.0kb downstream 13918 true Chr05: 42014462-42028379 Glycine max
Glyma.05G246600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 42018380-42028379 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306488 5265 Fabidae View MSA
124064066 5270 Rosid View MSA
123742930 5271 Pentapetalae View MSA
122785922 5272 Eudicot View MSA
122044561 5273 Angiosperm View MSA
121346755 5274 Embryophyte View MSA
123426673 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.425 0.0 35.2693    
cufflinks 8.21322 0.0 39.6471    
cufflinks 11.5312 0.0 52.4147   High
cufflinks 6.76228 0.0 35.6828    
cufflinks 5.06253 0.0 29.0813   Low
cufflinks 4.95861 0.0 25.3642   Low
cufflinks 7.69432 0.0 39.1069    
cufflinks 7.21258 0.0 32.9752    
cufflinks 6.44087 0.0 35.0186    
cufflinks 0.448        
cufflinks 0.3       Low
cufflinks 0.944        
cufflinks 0.615        
cufflinks 0.743        
cufflinks 0.309       Low
cufflinks 0.861        
cufflinks 0.299       Low
cufflinks 1.161       High
cufflinks 1.216       High
cufflinks 0.908        
cufflinks 0.24       Low
cufflinks 0.948        
cufflinks 0.954        
cufflinks 0.434        
cufflinks 0.968        
cufflinks 0.241       Low

0 Strain