Gene : Glyma.05G247000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR15454 - NISCHARIN RELATED Genomic Order:  2470
Name:  ? Glyma.05G247000 Secondary Identifier:  ? PAC:30526209
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G247000 0.5kb upstream 0.5kb upstream 14452 true Chr05: 42037388-42051839 Glycine max
Glyma.05G247000 0.5kb upstream 0.5kb upstream 500 false Chr05: 42037388-42037887 Glycine max
Glyma.05G247000 0.5kb downstream 0.5kb downstream 14452 true Chr05: 42037888-42052339 Glycine max
Glyma.05G247000 0.5kb downstream 0.5kb downstream 500 false Chr05: 42051840-42052339 Glycine max
Glyma.05G247000 1.0kb upstream 1.0kb upstream 14952 true Chr05: 42036888-42051839 Glycine max
Glyma.05G247000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 42036888-42037887 Glycine max
Glyma.05G247000 1.0kb downstream 1.0kb downstream 14952 true Chr05: 42037888-42052839 Glycine max
Glyma.05G247000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 42051840-42052839 Glycine max
Glyma.05G247000 2.0kb upstream 2.0kb upstream 15952 true Chr05: 42035888-42051839 Glycine max
Glyma.05G247000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 42035888-42037887 Glycine max
Glyma.05G247000 2.0kb downstream 2.0kb downstream 15952 true Chr05: 42037888-42053839 Glycine max
Glyma.05G247000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 42051840-42053839 Glycine max
Glyma.05G247000 5.0kb upstream 5.0kb upstream 18952 true Chr05: 42032888-42051839 Glycine max
Glyma.05G247000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 42032888-42037887 Glycine max
Glyma.05G247000 5.0kb downstream 5.0kb downstream 18952 true Chr05: 42037888-42056839 Glycine max
Glyma.05G247000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 42051840-42056839 Glycine max
Glyma.05G247000 10.0kb upstream 10.0kb upstream 23952 true Chr05: 42027888-42051839 Glycine max
Glyma.05G247000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 42027888-42037887 Glycine max
Glyma.05G247000 10.0kb downstream 10.0kb downstream 23952 true Chr05: 42037888-42061839 Glycine max
Glyma.05G247000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 42051840-42061839 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304834 5265 Fabidae View MSA
124068979 5270 Rosid View MSA
123746713 5271 Pentapetalae View MSA
122789922 5272 Eudicot View MSA
122043032 5273 Angiosperm View MSA
121348804 5274 Embryophyte View MSA
123427587 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.60838 0.0 15.2605    
cufflinks 3.13971 0.0 12.9811    
cufflinks 2.99846 0.0 12.6239    
cufflinks 4.73164 0.0 19.7331   High
cufflinks 3.0234 0.0 12.8058    
cufflinks 2.43367 0.0 10.8444    
cufflinks 2.46914 0.0 11.1369    
cufflinks 6.84087 0.0 27.9966   High
cufflinks 2.48779 0.0 12.2846    
cufflinks 0.319       High
cufflinks 0.101       Low
cufflinks 0.176        
cufflinks 0.188        
cufflinks 0.179        
cufflinks 0.119       Low
cufflinks 0.167        
cufflinks 0.191        
cufflinks 0.26       High
cufflinks 0.239        
cufflinks 0.225        
cufflinks 0.125       Low
cufflinks 0.226        
cufflinks 0.177        
cufflinks 0.13        
cufflinks 0.2        
cufflinks 0.121       Low

0 Strain