Gene : Glyma.06G037700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33348:SF3 - C-TERMINALLY ENCODED PEPTIDE 1 Genomic Order:  377
Name:  ? Glyma.06G037700 Secondary Identifier:  ? PAC:30551604
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G037700 0.5kb upstream 0.5kb upstream 1449 true Chr06: 2890671-2892119 Glycine max
Glyma.06G037700 0.5kb upstream 0.5kb upstream 500 false Chr06: 2891620-2892119 Glycine max
Glyma.06G037700 0.5kb downstream 0.5kb downstream 1449 true Chr06: 2890171-2891619 Glycine max
Glyma.06G037700 0.5kb downstream 0.5kb downstream 500 false Chr06: 2890171-2890670 Glycine max
Glyma.06G037700 1.0kb upstream 1.0kb upstream 1949 true Chr06: 2890671-2892619 Glycine max
Glyma.06G037700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 2891620-2892619 Glycine max
Glyma.06G037700 1.0kb downstream 1.0kb downstream 1949 true Chr06: 2889671-2891619 Glycine max
Glyma.06G037700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 2889671-2890670 Glycine max
Glyma.06G037700 2.0kb upstream 2.0kb upstream 2949 true Chr06: 2890671-2893619 Glycine max
Glyma.06G037700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 2891620-2893619 Glycine max
Glyma.06G037700 2.0kb downstream 2.0kb downstream 2949 true Chr06: 2888671-2891619 Glycine max
Glyma.06G037700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 2888671-2890670 Glycine max
Glyma.06G037700 5.0kb upstream 5.0kb upstream 5949 true Chr06: 2890671-2896619 Glycine max
Glyma.06G037700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 2891620-2896619 Glycine max
Glyma.06G037700 5.0kb downstream 5.0kb downstream 5949 true Chr06: 2885671-2891619 Glycine max
Glyma.06G037700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 2885671-2890670 Glycine max
Glyma.06G037700 10.0kb upstream 10.0kb upstream 10949 true Chr06: 2890671-2901619 Glycine max
Glyma.06G037700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 2891620-2901619 Glycine max
Glyma.06G037700 10.0kb downstream 10.0kb downstream 10949 true Chr06: 2880671-2891619 Glycine max
Glyma.06G037700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 2880671-2890670 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121617922 5273 Angiosperm View MSA
122254500 5265 Fabidae View MSA
123996626 5270 Rosid View MSA
123571063 5271 Pentapetalae View MSA
122605793 5272 Eudicot View MSA
120890052 5274 Embryophyte View MSA
122930744 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.484071 0.0 1.87227    
cufflinks 6.71693 0.0 21.3095    
cufflinks 0.51691 0.0 1.99095    
cufflinks 0.716845 0.0 2.72167    
cufflinks 0.70837 0.0 2.69368    
cufflinks 0.296171 0.0 1.16694    
cufflinks 0.539614 0.0 2.07751    
cufflinks 117.478 0.0 327.606 High High
cufflinks 3.31829 0.0 11.4946    
cufflinks 8.827     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.643        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.848        
cufflinks 0.349        
cufflinks 0.129        
cufflinks 4.041       High
cufflinks 5.982       High
cufflinks 0.129        
cufflinks 0.026     Low Low
cufflinks 0.264        
cufflinks 0.475        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.162        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain