Gene : Glyma.06G040900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10015:SF159 - HEAT STRESS TRANSCRIPTION FACTOR B-4 Genomic Order:  409
Name:  ? Glyma.06G040900 Secondary Identifier:  ? PAC:30554194
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G040900 0.5kb upstream 0.5kb upstream 2109 true Chr06: 3084559-3086667 Glycine max
Glyma.06G040900 0.5kb upstream 0.5kb upstream 500 false Chr06: 3086168-3086667 Glycine max
Glyma.06G040900 0.5kb downstream 0.5kb downstream 2109 true Chr06: 3084059-3086167 Glycine max
Glyma.06G040900 0.5kb downstream 0.5kb downstream 500 false Chr06: 3084059-3084558 Glycine max
Glyma.06G040900 1.0kb upstream 1.0kb upstream 2609 true Chr06: 3084559-3087167 Glycine max
Glyma.06G040900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3086168-3087167 Glycine max
Glyma.06G040900 1.0kb downstream 1.0kb downstream 2609 true Chr06: 3083559-3086167 Glycine max
Glyma.06G040900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3083559-3084558 Glycine max
Glyma.06G040900 2.0kb upstream 2.0kb upstream 3609 true Chr06: 3084559-3088167 Glycine max
Glyma.06G040900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3086168-3088167 Glycine max
Glyma.06G040900 2.0kb downstream 2.0kb downstream 3609 true Chr06: 3082559-3086167 Glycine max
Glyma.06G040900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3082559-3084558 Glycine max
Glyma.06G040900 5.0kb upstream 5.0kb upstream 6609 true Chr06: 3084559-3091167 Glycine max
Glyma.06G040900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3086168-3091167 Glycine max
Glyma.06G040900 5.0kb downstream 5.0kb downstream 6609 true Chr06: 3079559-3086167 Glycine max
Glyma.06G040900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3079559-3084558 Glycine max
Glyma.06G040900 10.0kb upstream 10.0kb upstream 11609 true Chr06: 3084559-3096167 Glycine max
Glyma.06G040900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3086168-3096167 Glycine max
Glyma.06G040900 10.0kb downstream 10.0kb downstream 11609 true Chr06: 3074559-3086167 Glycine max
Glyma.06G040900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3074559-3084558 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300682 5265 Fabidae View MSA
124067308 5270 Rosid View MSA
123751235 5271 Pentapetalae View MSA
122790497 5272 Eudicot View MSA
122050286 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.782073 0.0 2.85775   Low
cufflinks 13.3471 0.0 36.142   High
cufflinks 1.05328 0.0 3.78256   Low
cufflinks 3.92914 0.0 12.1389    
cufflinks 4.23051 0.0 12.9094    
cufflinks 1.33494 0.0 4.70153    
cufflinks 8.12423 0.0 22.8497    
cufflinks 9.16488 0.0 25.4213    
cufflinks 4.94407 0.0 14.7707    
cufflinks 4.694        
cufflinks 0.048     Low Low
cufflinks 2.27        
cufflinks 3.591        
cufflinks 5.275        
cufflinks 0.301        
cufflinks 3.634        
cufflinks 0.121       Low
cufflinks 1.652        
cufflinks 8.013     High High
cufflinks 3.315        
cufflinks 0.065       Low
cufflinks 3.583        
cufflinks 4.421        
cufflinks 0.103       Low
cufflinks 2.675        
cufflinks 0.224        

0 Strain