Gene : Glyma.06G041000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING Genomic Order:  410
Name:  ? Glyma.06G041000 Secondary Identifier:  ? PAC:30550421
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G041000 0.5kb upstream 0.5kb upstream 8103 true Chr06: 3104225-3112327 Glycine max
Glyma.06G041000 0.5kb upstream 0.5kb upstream 500 false Chr06: 3111828-3112327 Glycine max
Glyma.06G041000 0.5kb downstream 0.5kb downstream 8103 true Chr06: 3103725-3111827 Glycine max
Glyma.06G041000 0.5kb downstream 0.5kb downstream 500 false Chr06: 3103725-3104224 Glycine max
Glyma.06G041000 1.0kb upstream 1.0kb upstream 8603 true Chr06: 3104225-3112827 Glycine max
Glyma.06G041000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3111828-3112827 Glycine max
Glyma.06G041000 1.0kb downstream 1.0kb downstream 8603 true Chr06: 3103225-3111827 Glycine max
Glyma.06G041000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3103225-3104224 Glycine max
Glyma.06G041000 2.0kb upstream 2.0kb upstream 9603 true Chr06: 3104225-3113827 Glycine max
Glyma.06G041000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3111828-3113827 Glycine max
Glyma.06G041000 2.0kb downstream 2.0kb downstream 9603 true Chr06: 3102225-3111827 Glycine max
Glyma.06G041000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3102225-3104224 Glycine max
Glyma.06G041000 5.0kb upstream 5.0kb upstream 12603 true Chr06: 3104225-3116827 Glycine max
Glyma.06G041000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3111828-3116827 Glycine max
Glyma.06G041000 5.0kb downstream 5.0kb downstream 12603 true Chr06: 3099225-3111827 Glycine max
Glyma.06G041000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3099225-3104224 Glycine max
Glyma.06G041000 10.0kb upstream 10.0kb upstream 17603 true Chr06: 3104225-3121827 Glycine max
Glyma.06G041000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3111828-3121827 Glycine max
Glyma.06G041000 10.0kb downstream 10.0kb downstream 17603 true Chr06: 3094225-3111827 Glycine max
Glyma.06G041000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3094225-3104224 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304615 5265 Fabidae View MSA
124061889 5270 Rosid View MSA
123751364 5271 Pentapetalae View MSA
122793070 5272 Eudicot View MSA
122041627 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351500 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.0864 0.0 54.1102    
cufflinks 13.7906 0.0 57.5033    
cufflinks 20.6594 0.0 97.8716 High High
cufflinks 11.6456 0.0 48.1753    
cufflinks 10.8166 0.0 41.473   Low
cufflinks 13.4015 0.0 56.1503    
cufflinks 18.8358 0.0 80.9636   High
cufflinks 12.119 0.0 50.5757    
cufflinks 12.3266 0.0 47.0339    
cufflinks 1.156        
cufflinks 1.65        
cufflinks 1.505        
cufflinks 1.022       Low
cufflinks 1.075       Low
cufflinks 1.67        
cufflinks 1.593        
cufflinks 1.031       Low
cufflinks 1.316        
cufflinks 1.348        
cufflinks 1.796       High
cufflinks 1.45        
cufflinks 1.662        
cufflinks 1.05       Low
cufflinks 1.826       High
cufflinks 1.711        
cufflinks 1.432        

0 Strain