Gene : Glyma.06G042900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10177//PTHR10177:SF242 - CYCLINE Genomic Order:  429
Name:  ? Glyma.06G042900 Secondary Identifier:  ? PAC:30550884
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G042900 0.5kb upstream 0.5kb upstream 2640 true Chr06: 3263537-3266176 Glycine max
Glyma.06G042900 0.5kb upstream 0.5kb upstream 500 false Chr06: 3263537-3264036 Glycine max
Glyma.06G042900 0.5kb downstream 0.5kb downstream 2640 true Chr06: 3264037-3266676 Glycine max
Glyma.06G042900 0.5kb downstream 0.5kb downstream 500 false Chr06: 3266177-3266676 Glycine max
Glyma.06G042900 1.0kb upstream 1.0kb upstream 3140 true Chr06: 3263037-3266176 Glycine max
Glyma.06G042900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3263037-3264036 Glycine max
Glyma.06G042900 1.0kb downstream 1.0kb downstream 3140 true Chr06: 3264037-3267176 Glycine max
Glyma.06G042900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3266177-3267176 Glycine max
Glyma.06G042900 2.0kb upstream 2.0kb upstream 4140 true Chr06: 3262037-3266176 Glycine max
Glyma.06G042900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3262037-3264036 Glycine max
Glyma.06G042900 2.0kb downstream 2.0kb downstream 4140 true Chr06: 3264037-3268176 Glycine max
Glyma.06G042900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3266177-3268176 Glycine max
Glyma.06G042900 5.0kb upstream 5.0kb upstream 7140 true Chr06: 3259037-3266176 Glycine max
Glyma.06G042900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3259037-3264036 Glycine max
Glyma.06G042900 5.0kb downstream 5.0kb downstream 7140 true Chr06: 3264037-3271176 Glycine max
Glyma.06G042900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3266177-3271176 Glycine max
Glyma.06G042900 10.0kb upstream 10.0kb upstream 12140 true Chr06: 3254037-3266176 Glycine max
Glyma.06G042900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3254037-3264036 Glycine max
Glyma.06G042900 10.0kb downstream 10.0kb downstream 12140 true Chr06: 3264037-3276176 Glycine max
Glyma.06G042900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3266177-3276176 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122051916 5273 Angiosperm View MSA
122303938 5265 Fabidae View MSA
124071465 5270 Rosid View MSA
123745263 5271 Pentapetalae View MSA
122796369 5272 Eudicot View MSA
121312796 5274 Embryophyte View MSA
123428428 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.0232 0.0 7.23099   Low
cufflinks 40.6618 0.0 154.78 High High
cufflinks 10.4566 0.0 38.1027    
cufflinks 20.311 0.0 70.7666 High  
cufflinks 8.1347 0.0 31.0965    
cufflinks 9.97036 0.0 30.9518    
cufflinks 70.7028 0.0 310.736 High High
cufflinks 7.58956 0.0 29.0022    
cufflinks 5.13538 0.0 18.1603    
cufflinks 1.484        
cufflinks 0.035     Low Low
cufflinks 7.481     High  
cufflinks 3.102        
cufflinks 2.227        
cufflinks 0.018     Low Low
cufflinks 16.698     High  
cufflinks 0.604        
cufflinks 8.22     High  
cufflinks 14.964     High  
cufflinks 13.722     High  
cufflinks 0.106       Low
cufflinks 15.727     High  
cufflinks 18.298     High  
cufflinks 0.027     Low Low
cufflinks 10.837     High  
cufflinks 0.362        

0 Strain