Gene : Glyma.06G043700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR34362:SF1 - WPP DOMAIN-CONTAINING PROTEIN 1-RELATED Genomic Order:  437
Name:  ? Glyma.06G043700 Secondary Identifier:  ? PAC:30553242
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G043700 0.5kb upstream 0.5kb upstream 2016 true Chr06: 3331284-3333299 Glycine max
Glyma.06G043700 0.5kb upstream 0.5kb upstream 500 false Chr06: 3332800-3333299 Glycine max
Glyma.06G043700 0.5kb downstream 0.5kb downstream 2016 true Chr06: 3330784-3332799 Glycine max
Glyma.06G043700 0.5kb downstream 0.5kb downstream 500 false Chr06: 3330784-3331283 Glycine max
Glyma.06G043700 1.0kb upstream 1.0kb upstream 2516 true Chr06: 3331284-3333799 Glycine max
Glyma.06G043700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3332800-3333799 Glycine max
Glyma.06G043700 1.0kb downstream 1.0kb downstream 2516 true Chr06: 3330284-3332799 Glycine max
Glyma.06G043700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3330284-3331283 Glycine max
Glyma.06G043700 2.0kb upstream 2.0kb upstream 3516 true Chr06: 3331284-3334799 Glycine max
Glyma.06G043700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3332800-3334799 Glycine max
Glyma.06G043700 2.0kb downstream 2.0kb downstream 3516 true Chr06: 3329284-3332799 Glycine max
Glyma.06G043700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3329284-3331283 Glycine max
Glyma.06G043700 5.0kb upstream 5.0kb upstream 6516 true Chr06: 3331284-3337799 Glycine max
Glyma.06G043700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3332800-3337799 Glycine max
Glyma.06G043700 5.0kb downstream 5.0kb downstream 6516 true Chr06: 3326284-3332799 Glycine max
Glyma.06G043700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3326284-3331283 Glycine max
Glyma.06G043700 10.0kb upstream 10.0kb upstream 11516 true Chr06: 3331284-3342799 Glycine max
Glyma.06G043700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3332800-3342799 Glycine max
Glyma.06G043700 10.0kb downstream 10.0kb downstream 11516 true Chr06: 3321284-3332799 Glycine max
Glyma.06G043700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3321284-3331283 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313692 5265 Fabidae View MSA
124061872 5270 Rosid View MSA
123739220 5271 Pentapetalae View MSA
122792231 5272 Eudicot View MSA
122045089 5273 Angiosperm View MSA
121310396 5274 Embryophyte View MSA
123347890 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.18707 0.0 26.1934   Low
cufflinks 24.0984 0.0 64.4193 High  
cufflinks 19.7299 0.0 53.1482    
cufflinks 23.1214 0.0 61.8836 High  
cufflinks 24.7042 0.0 65.9517 High  
cufflinks 14.7649 0.0 40.2239    
cufflinks 17.8726 0.0 48.2254    
cufflinks 25.991 0.0 69.3983 High High
cufflinks 15.067 0.0 41.0264    
cufflinks 7.114       High
cufflinks 1.173       Low
cufflinks 3.302        
cufflinks 4.669        
cufflinks 3.642        
cufflinks 0.971       Low
cufflinks 4.209        
cufflinks 1.694        
cufflinks 4.039        
cufflinks 6.494       High
cufflinks 2.292        
cufflinks 1.657        
cufflinks 2.442        
cufflinks 2.361        
cufflinks 1.294       Low
cufflinks 2.529        
cufflinks 2.295        

0 Strain