Gene : Glyma.06G044400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23201//PTHR23201:SF4 - EXTENSIN, PROLINE-RICH PROTEIN Genomic Order:  444
Name:  ? Glyma.06G044400 Secondary Identifier:  ? PAC:30549969
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G044400 0.5kb upstream 0.5kb upstream 1492 true Chr06: 3381869-3383360 Glycine max
Glyma.06G044400 0.5kb upstream 0.5kb upstream 500 false Chr06: 3382861-3383360 Glycine max
Glyma.06G044400 0.5kb downstream 0.5kb downstream 1492 true Chr06: 3381369-3382860 Glycine max
Glyma.06G044400 0.5kb downstream 0.5kb downstream 500 false Chr06: 3381369-3381868 Glycine max
Glyma.06G044400 1.0kb upstream 1.0kb upstream 1992 true Chr06: 3381869-3383860 Glycine max
Glyma.06G044400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3382861-3383860 Glycine max
Glyma.06G044400 1.0kb downstream 1.0kb downstream 1992 true Chr06: 3380869-3382860 Glycine max
Glyma.06G044400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3380869-3381868 Glycine max
Glyma.06G044400 2.0kb upstream 2.0kb upstream 2992 true Chr06: 3381869-3384860 Glycine max
Glyma.06G044400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3382861-3384860 Glycine max
Glyma.06G044400 2.0kb downstream 2.0kb downstream 2992 true Chr06: 3379869-3382860 Glycine max
Glyma.06G044400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3379869-3381868 Glycine max
Glyma.06G044400 5.0kb upstream 5.0kb upstream 5992 true Chr06: 3381869-3387860 Glycine max
Glyma.06G044400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3382861-3387860 Glycine max
Glyma.06G044400 5.0kb downstream 5.0kb downstream 5992 true Chr06: 3376869-3382860 Glycine max
Glyma.06G044400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3376869-3381868 Glycine max
Glyma.06G044400 10.0kb upstream 10.0kb upstream 10992 true Chr06: 3381869-3392860 Glycine max
Glyma.06G044400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3382861-3392860 Glycine max
Glyma.06G044400 10.0kb downstream 10.0kb downstream 10992 true Chr06: 3371869-3382860 Glycine max
Glyma.06G044400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3371869-3381868 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311621 5265 Fabidae View MSA
124074083 5270 Rosid View MSA
123750435 5271 Pentapetalae View MSA
122791253 5272 Eudicot View MSA
122044591 5273 Angiosperm View MSA
121310316 5274 Embryophyte View MSA
123347833 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.241 0.0 68.4803 High  
cufflinks 0.558182 0.0 2.13915    
cufflinks 344.771 0.0 1153.84 High High
cufflinks 33.0031 0.0 88.4457 High  
cufflinks 0.0256311 0.0 0.117754 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 333.716 0.0 1105.66 High High
cufflinks 0.978417 0.0 3.65503    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 162.396     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.759        
cufflinks 0.018     Low  
cufflinks 90.358     High High
cufflinks 0.211        
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.154        
cufflinks 0.144        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.393        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain