Gene : Glyma.06G044900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR19957//PTHR19957:SF118 - SYNTAXIN Genomic Order:  449
Name:  ? Glyma.06G044900 Secondary Identifier:  ? PAC:30554101
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G044900 0.5kb upstream 0.5kb upstream 3413 true Chr06: 3404974-3408386 Glycine max
Glyma.06G044900 0.5kb upstream 0.5kb upstream 500 false Chr06: 3407887-3408386 Glycine max
Glyma.06G044900 0.5kb downstream 0.5kb downstream 3413 true Chr06: 3404474-3407886 Glycine max
Glyma.06G044900 0.5kb downstream 0.5kb downstream 500 false Chr06: 3404474-3404973 Glycine max
Glyma.06G044900 1.0kb upstream 1.0kb upstream 3913 true Chr06: 3404974-3408886 Glycine max
Glyma.06G044900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3407887-3408886 Glycine max
Glyma.06G044900 1.0kb downstream 1.0kb downstream 3913 true Chr06: 3403974-3407886 Glycine max
Glyma.06G044900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3403974-3404973 Glycine max
Glyma.06G044900 2.0kb upstream 2.0kb upstream 4913 true Chr06: 3404974-3409886 Glycine max
Glyma.06G044900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3407887-3409886 Glycine max
Glyma.06G044900 2.0kb downstream 2.0kb downstream 4913 true Chr06: 3402974-3407886 Glycine max
Glyma.06G044900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3402974-3404973 Glycine max
Glyma.06G044900 5.0kb upstream 5.0kb upstream 7913 true Chr06: 3404974-3412886 Glycine max
Glyma.06G044900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3407887-3412886 Glycine max
Glyma.06G044900 5.0kb downstream 5.0kb downstream 7913 true Chr06: 3399974-3407886 Glycine max
Glyma.06G044900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3399974-3404973 Glycine max
Glyma.06G044900 10.0kb upstream 10.0kb upstream 12913 true Chr06: 3404974-3417886 Glycine max
Glyma.06G044900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3407887-3417886 Glycine max
Glyma.06G044900 10.0kb downstream 10.0kb downstream 12913 true Chr06: 3394974-3407886 Glycine max
Glyma.06G044900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3394974-3404973 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309285 5265 Fabidae View MSA
124064346 5270 Rosid View MSA
123743910 5271 Pentapetalae View MSA
122788324 5272 Eudicot View MSA
122042907 5273 Angiosperm View MSA
121348883 5274 Embryophyte View MSA
123381058 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.98133 0.0 20.8814    
cufflinks 4.27351 0.0 16.3942    
cufflinks 25.8195 0.0 103.409 High High
cufflinks 4.5094 0.0 20.8152    
cufflinks 4.68692 0.0 22.1221    
cufflinks 5.27218 0.0 23.1618    
cufflinks 4.49271 0.0 17.0433    
cufflinks 5.60598 0.0 24.7039    
cufflinks 4.27779 0.0 16.4223    
cufflinks 2.287        
cufflinks 2.512       High
cufflinks 3.853       High
cufflinks 1.138       Low
cufflinks 1.152       Low
cufflinks 1.284        
cufflinks 1.279        
cufflinks 2.861       High
cufflinks 1.839        
cufflinks 1.359        
cufflinks 1.265        
cufflinks 1.823        
cufflinks 1.274        
cufflinks 1.521        
cufflinks 2.101        
cufflinks 1.219        
cufflinks 2.182        

0 Strain