Gene : Glyma.06G030500 G. max Wm82.a2.v1
Defline:  (1 of 23) 3.2.1.78 - Mannan endo-1,4-beta-mannosidase / Endo-1,4-mannanase Genomic Order:  305
Name:  ? Glyma.06G030500 Secondary Identifier:  ? PAC:30553468
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G030500 0.5kb upstream 0.5kb upstream 4997 true Chr06: 2395066-2400062 Glycine max
Glyma.06G030500 0.5kb upstream 0.5kb upstream 500 false Chr06: 2399563-2400062 Glycine max
Glyma.06G030500 0.5kb downstream 0.5kb downstream 4997 true Chr06: 2394566-2399562 Glycine max
Glyma.06G030500 0.5kb downstream 0.5kb downstream 500 false Chr06: 2394566-2395065 Glycine max
Glyma.06G030500 1.0kb upstream 1.0kb upstream 5497 true Chr06: 2395066-2400562 Glycine max
Glyma.06G030500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 2399563-2400562 Glycine max
Glyma.06G030500 1.0kb downstream 1.0kb downstream 5497 true Chr06: 2394066-2399562 Glycine max
Glyma.06G030500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 2394066-2395065 Glycine max
Glyma.06G030500 2.0kb upstream 2.0kb upstream 6497 true Chr06: 2395066-2401562 Glycine max
Glyma.06G030500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 2399563-2401562 Glycine max
Glyma.06G030500 2.0kb downstream 2.0kb downstream 6497 true Chr06: 2393066-2399562 Glycine max
Glyma.06G030500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 2393066-2395065 Glycine max
Glyma.06G030500 5.0kb upstream 5.0kb upstream 9497 true Chr06: 2395066-2404562 Glycine max
Glyma.06G030500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 2399563-2404562 Glycine max
Glyma.06G030500 5.0kb downstream 5.0kb downstream 9497 true Chr06: 2390066-2399562 Glycine max
Glyma.06G030500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 2390066-2395065 Glycine max
Glyma.06G030500 10.0kb upstream 10.0kb upstream 14497 true Chr06: 2395066-2409562 Glycine max
Glyma.06G030500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 2399563-2409562 Glycine max
Glyma.06G030500 10.0kb downstream 10.0kb downstream 14497 true Chr06: 2385066-2399562 Glycine max
Glyma.06G030500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 2385066-2395065 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303296 5265 Fabidae View MSA
124070975 5270 Rosid View MSA
123749910 5271 Pentapetalae View MSA
122795720 5272 Eudicot View MSA
122050009 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.9138 0.0 86.8128 High  
cufflinks 30.3533 0.0 94.5732 High  
cufflinks 31.3767 0.0 94.8338 High  
cufflinks 89.2441 0.0 300.024 High High
cufflinks 15.3079 0.0 49.5278    
cufflinks 15.41 0.0 45.7724    
cufflinks 32.9028 0.0 106.082 High  
cufflinks 45.5765 0.0 150.387 High  
cufflinks 8.98727 0.0 32.7612   Low
cufflinks 22.573     High  
cufflinks 0.106       Low
cufflinks 20.673     High  
cufflinks 1.349        
cufflinks 0.155       Low
cufflinks 0.055       Low
cufflinks 15.15     High  
cufflinks 1.515        
cufflinks 68.648     High High
cufflinks 14.121     High  
cufflinks 8.938     High  
cufflinks 0.237        
cufflinks 18.825     High  
cufflinks 16.552     High  
cufflinks 0.106       Low
cufflinks 16.951     High  
cufflinks 0.464        

0 Strain