Gene : Glyma.06G033500 G. max Wm82.a2.v1
Defline:  (1 of 788) PF13041 - PPR repeat family (PPR_2) Genomic Order:  335
Name:  ? Glyma.06G033500 Secondary Identifier:  ? PAC:30551590
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G033500 0.5kb upstream 0.5kb upstream 6042 true Chr06: 2584414-2590455 Glycine max
Glyma.06G033500 0.5kb upstream 0.5kb upstream 500 false Chr06: 2584414-2584913 Glycine max
Glyma.06G033500 0.5kb downstream 0.5kb downstream 6042 true Chr06: 2584914-2590955 Glycine max
Glyma.06G033500 0.5kb downstream 0.5kb downstream 500 false Chr06: 2590456-2590955 Glycine max
Glyma.06G033500 1.0kb upstream 1.0kb upstream 6542 true Chr06: 2583914-2590455 Glycine max
Glyma.06G033500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 2583914-2584913 Glycine max
Glyma.06G033500 1.0kb downstream 1.0kb downstream 6542 true Chr06: 2584914-2591455 Glycine max
Glyma.06G033500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 2590456-2591455 Glycine max
Glyma.06G033500 2.0kb upstream 2.0kb upstream 7542 true Chr06: 2582914-2590455 Glycine max
Glyma.06G033500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 2582914-2584913 Glycine max
Glyma.06G033500 2.0kb downstream 2.0kb downstream 7542 true Chr06: 2584914-2592455 Glycine max
Glyma.06G033500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 2590456-2592455 Glycine max
Glyma.06G033500 5.0kb upstream 5.0kb upstream 10542 true Chr06: 2579914-2590455 Glycine max
Glyma.06G033500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 2579914-2584913 Glycine max
Glyma.06G033500 5.0kb downstream 5.0kb downstream 10542 true Chr06: 2584914-2595455 Glycine max
Glyma.06G033500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 2590456-2595455 Glycine max
Glyma.06G033500 10.0kb upstream 10.0kb upstream 15542 true Chr06: 2574914-2590455 Glycine max
Glyma.06G033500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 2574914-2584913 Glycine max
Glyma.06G033500 10.0kb downstream 10.0kb downstream 15542 true Chr06: 2584914-2600455 Glycine max
Glyma.06G033500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 2590456-2600455 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306783 5265 Fabidae View MSA
124063635 5270 Rosid View MSA
123750862 5271 Pentapetalae View MSA
122792992 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.30751 0.0 8.78435   High
cufflinks 1.66043 0.0 8.81074   High
cufflinks 1.27167 0.0 5.58683    
cufflinks 0.899712 0.0 3.53087    
cufflinks 0.872033 0.0 3.55274    
cufflinks 0.913158 0.0 4.12541    
cufflinks 0.818386 0.0 3.43901    
cufflinks 0.945542 0.0 3.93822    
cufflinks 0.74686 0.0 2.97317    
cufflinks 0.879        
cufflinks 0.717        
cufflinks 2.354        
cufflinks 0.669       Low
cufflinks 0.971        
cufflinks 0.992        
cufflinks 3.083        
cufflinks 0.676       Low
cufflinks 2.426        
cufflinks 1.31        
cufflinks 4.619       High
cufflinks 0.662       Low
cufflinks 4.466       High
cufflinks 3.535       High
cufflinks 1.093        
cufflinks 3.952       High
cufflinks 0.583       Low

0 Strain