Gene : Glyma.06G034100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13286 - SAP30 Genomic Order:  341
Name:  ? Glyma.06G034100 Secondary Identifier:  ? PAC:30551915
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G034100 0.5kb upstream 0.5kb upstream 3922 true Chr06: 2634121-2638042 Glycine max
Glyma.06G034100 0.5kb upstream 0.5kb upstream 500 false Chr06: 2634121-2634620 Glycine max
Glyma.06G034100 0.5kb downstream 0.5kb downstream 3922 true Chr06: 2634621-2638542 Glycine max
Glyma.06G034100 0.5kb downstream 0.5kb downstream 500 false Chr06: 2638043-2638542 Glycine max
Glyma.06G034100 1.0kb upstream 1.0kb upstream 4422 true Chr06: 2633621-2638042 Glycine max
Glyma.06G034100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 2633621-2634620 Glycine max
Glyma.06G034100 1.0kb downstream 1.0kb downstream 4422 true Chr06: 2634621-2639042 Glycine max
Glyma.06G034100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 2638043-2639042 Glycine max
Glyma.06G034100 2.0kb upstream 2.0kb upstream 5422 true Chr06: 2632621-2638042 Glycine max
Glyma.06G034100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 2632621-2634620 Glycine max
Glyma.06G034100 2.0kb downstream 2.0kb downstream 5422 true Chr06: 2634621-2640042 Glycine max
Glyma.06G034100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 2638043-2640042 Glycine max
Glyma.06G034100 5.0kb upstream 5.0kb upstream 8422 true Chr06: 2629621-2638042 Glycine max
Glyma.06G034100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 2629621-2634620 Glycine max
Glyma.06G034100 5.0kb downstream 5.0kb downstream 8422 true Chr06: 2634621-2643042 Glycine max
Glyma.06G034100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 2638043-2643042 Glycine max
Glyma.06G034100 10.0kb upstream 10.0kb upstream 13422 true Chr06: 2624621-2638042 Glycine max
Glyma.06G034100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 2624621-2634620 Glycine max
Glyma.06G034100 10.0kb downstream 10.0kb downstream 13422 true Chr06: 2634621-2648042 Glycine max
Glyma.06G034100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 2638043-2648042 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300805 5265 Fabidae View MSA
124061386 5270 Rosid View MSA
123744780 5271 Pentapetalae View MSA
122793976 5272 Eudicot View MSA
122051007 5273 Angiosperm View MSA
121350494 5274 Embryophyte View MSA
123427737 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.49191 0.0 33.7669   Low
cufflinks 41.0016 0.0 202.727 High High
cufflinks 19.4442 0.0 90.6009    
cufflinks 30.108 0.0 149.295 High  
cufflinks 11.5309 0.0 55.586    
cufflinks 13.0196 0.0 63.1338    
cufflinks 47.4943 0.0 230.768 High High
cufflinks 26.39 0.0 120.515 High  
cufflinks 16.9374 0.0 77.3395    
cufflinks 4.804        
cufflinks 2.063        
cufflinks 4.412        
cufflinks 1.458       Low
cufflinks 0.919       Low
cufflinks 2.969        
cufflinks 6.348       High
cufflinks 2.254        
cufflinks 4.742        
cufflinks 8.149     High High
cufflinks 5.705        
cufflinks 1.634       Low
cufflinks 5.179        
cufflinks 5.791        
cufflinks 1.282       Low
cufflinks 6.284        
cufflinks 2.252        

0 Strain