Gene : Glyma.06G034200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13286 - SAP30 Genomic Order:  342
Name:  ? Glyma.06G034200 Secondary Identifier:  ? PAC:30551185
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G034200 0.5kb upstream 0.5kb upstream 5811 true Chr06: 2642347-2648157 Glycine max
Glyma.06G034200 0.5kb upstream 0.5kb upstream 500 false Chr06: 2642347-2642846 Glycine max
Glyma.06G034200 0.5kb downstream 0.5kb downstream 5811 true Chr06: 2642847-2648657 Glycine max
Glyma.06G034200 0.5kb downstream 0.5kb downstream 500 false Chr06: 2648158-2648657 Glycine max
Glyma.06G034200 1.0kb upstream 1.0kb upstream 6311 true Chr06: 2641847-2648157 Glycine max
Glyma.06G034200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 2641847-2642846 Glycine max
Glyma.06G034200 1.0kb downstream 1.0kb downstream 6311 true Chr06: 2642847-2649157 Glycine max
Glyma.06G034200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 2648158-2649157 Glycine max
Glyma.06G034200 2.0kb upstream 2.0kb upstream 7311 true Chr06: 2640847-2648157 Glycine max
Glyma.06G034200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 2640847-2642846 Glycine max
Glyma.06G034200 2.0kb downstream 2.0kb downstream 7311 true Chr06: 2642847-2650157 Glycine max
Glyma.06G034200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 2648158-2650157 Glycine max
Glyma.06G034200 5.0kb upstream 5.0kb upstream 10311 true Chr06: 2637847-2648157 Glycine max
Glyma.06G034200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 2637847-2642846 Glycine max
Glyma.06G034200 5.0kb downstream 5.0kb downstream 10311 true Chr06: 2642847-2653157 Glycine max
Glyma.06G034200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 2648158-2653157 Glycine max
Glyma.06G034200 10.0kb upstream 10.0kb upstream 15311 true Chr06: 2632847-2648157 Glycine max
Glyma.06G034200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 2632847-2642846 Glycine max
Glyma.06G034200 10.0kb downstream 10.0kb downstream 15311 true Chr06: 2642847-2658157 Glycine max
Glyma.06G034200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 2648158-2658157 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300805 5265 Fabidae View MSA
124061386 5270 Rosid View MSA
123744780 5271 Pentapetalae View MSA
122793976 5272 Eudicot View MSA
122051007 5273 Angiosperm View MSA
121350494 5274 Embryophyte View MSA
123427737 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.59204 0.0 16.4375   Low
cufflinks 21.0637 0.0 56.2055 High High
cufflinks 9.70211 0.0 26.7768    
cufflinks 14.018 0.0 37.8199    
cufflinks 7.16942 0.0 20.4352   Low
cufflinks 9.35015 0.0 25.9231    
cufflinks 21.7477 0.0 58.0271   High
cufflinks 12.0862 0.0 32.8768    
cufflinks 11.2167 0.0 30.6491    
cufflinks 3.122        
cufflinks 0.952       Low
cufflinks 3.536        
cufflinks 1.867        
cufflinks 1.459        
cufflinks 2.336        
cufflinks 5.41        
cufflinks 0.89       Low
cufflinks 4.473        
cufflinks 6.865       High
cufflinks 5.406        
cufflinks 0.94       Low
cufflinks 5.03        
cufflinks 5.364        
cufflinks 0.826       Low
cufflinks 6.157       High
cufflinks 1.095       Low

0 Strain