Gene : Glyma.06G034500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12313//PTHR12313:SF10 - RNF5 Genomic Order:  345
Name:  ? Glyma.06G034500 Secondary Identifier:  ? PAC:30551912
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G034500 0.5kb upstream 0.5kb upstream 2345 true Chr06: 2676748-2679092 Glycine max
Glyma.06G034500 0.5kb upstream 0.5kb upstream 500 false Chr06: 2676748-2677247 Glycine max
Glyma.06G034500 0.5kb downstream 0.5kb downstream 2345 true Chr06: 2677248-2679592 Glycine max
Glyma.06G034500 0.5kb downstream 0.5kb downstream 500 false Chr06: 2679093-2679592 Glycine max
Glyma.06G034500 1.0kb upstream 1.0kb upstream 2845 true Chr06: 2676248-2679092 Glycine max
Glyma.06G034500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 2676248-2677247 Glycine max
Glyma.06G034500 1.0kb downstream 1.0kb downstream 2845 true Chr06: 2677248-2680092 Glycine max
Glyma.06G034500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 2679093-2680092 Glycine max
Glyma.06G034500 2.0kb upstream 2.0kb upstream 3845 true Chr06: 2675248-2679092 Glycine max
Glyma.06G034500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 2675248-2677247 Glycine max
Glyma.06G034500 2.0kb downstream 2.0kb downstream 3845 true Chr06: 2677248-2681092 Glycine max
Glyma.06G034500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 2679093-2681092 Glycine max
Glyma.06G034500 5.0kb upstream 5.0kb upstream 6845 true Chr06: 2672248-2679092 Glycine max
Glyma.06G034500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 2672248-2677247 Glycine max
Glyma.06G034500 5.0kb downstream 5.0kb downstream 6845 true Chr06: 2677248-2684092 Glycine max
Glyma.06G034500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 2679093-2684092 Glycine max
Glyma.06G034500 10.0kb upstream 10.0kb upstream 11845 true Chr06: 2667248-2679092 Glycine max
Glyma.06G034500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 2667248-2677247 Glycine max
Glyma.06G034500 10.0kb downstream 10.0kb downstream 11845 true Chr06: 2677248-2689092 Glycine max
Glyma.06G034500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 2679093-2689092 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303958 5265 Fabidae View MSA
124066658 5270 Rosid View MSA
123750017 5271 Pentapetalae View MSA
122793132 5272 Eudicot View MSA
122043579 5273 Angiosperm View MSA
121350090 5274 Embryophyte View MSA
123428794 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.76 0.0 40.9957    
cufflinks 7.33552 0.0 28.8681   Low
cufflinks 22.6078 0.0 67.8249 High High
cufflinks 9.24735 0.0 31.9925    
cufflinks 11.5168 0.0 44.8477    
cufflinks 13.0893 0.0 41.8062    
cufflinks 10.5151 0.0 34.9148    
cufflinks 9.88253 0.0 33.7466    
cufflinks 10.7883 0.0 43.2765    
cufflinks 8.142     High High
cufflinks 5.287        
cufflinks 6.462       High
cufflinks 2.589       Low
cufflinks 2.399       Low
cufflinks 4.462        
cufflinks 2.828        
cufflinks 6.676     High High
cufflinks 4.064        
cufflinks 3.087        
cufflinks 3.013        
cufflinks 3.866        
cufflinks 2.968        
cufflinks 3.853        
cufflinks 6.952     High High
cufflinks 2.594       Low
cufflinks 4.488        

0 Strain