Gene : Glyma.06G025400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31580:SF4 - FILAMENT-LIKE PLANT PROTEIN 4-RELATED Genomic Order:  254
Name:  ? Glyma.06G025400 Secondary Identifier:  ? PAC:30549401
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G025400 0.5kb upstream 0.5kb upstream 6400 true Chr06: 1933300-1939699 Glycine max
Glyma.06G025400 0.5kb upstream 0.5kb upstream 500 false Chr06: 1939200-1939699 Glycine max
Glyma.06G025400 0.5kb downstream 0.5kb downstream 6400 true Chr06: 1932800-1939199 Glycine max
Glyma.06G025400 0.5kb downstream 0.5kb downstream 500 false Chr06: 1932800-1933299 Glycine max
Glyma.06G025400 1.0kb upstream 1.0kb upstream 6900 true Chr06: 1933300-1940199 Glycine max
Glyma.06G025400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1939200-1940199 Glycine max
Glyma.06G025400 1.0kb downstream 1.0kb downstream 6900 true Chr06: 1932300-1939199 Glycine max
Glyma.06G025400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1932300-1933299 Glycine max
Glyma.06G025400 2.0kb upstream 2.0kb upstream 7900 true Chr06: 1933300-1941199 Glycine max
Glyma.06G025400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1939200-1941199 Glycine max
Glyma.06G025400 2.0kb downstream 2.0kb downstream 7900 true Chr06: 1931300-1939199 Glycine max
Glyma.06G025400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1931300-1933299 Glycine max
Glyma.06G025400 5.0kb upstream 5.0kb upstream 10900 true Chr06: 1933300-1944199 Glycine max
Glyma.06G025400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1939200-1944199 Glycine max
Glyma.06G025400 5.0kb downstream 5.0kb downstream 10900 true Chr06: 1928300-1939199 Glycine max
Glyma.06G025400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1928300-1933299 Glycine max
Glyma.06G025400 10.0kb upstream 10.0kb upstream 15900 true Chr06: 1933300-1949199 Glycine max
Glyma.06G025400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1939200-1949199 Glycine max
Glyma.06G025400 10.0kb downstream 10.0kb downstream 15900 true Chr06: 1923300-1939199 Glycine max
Glyma.06G025400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1923300-1933299 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311025 5265 Fabidae View MSA
124071208 5270 Rosid View MSA
123744049 5271 Pentapetalae View MSA
122790238 5272 Eudicot View MSA
122044251 5273 Angiosperm View MSA
121351576 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.5011 0.0 43.7998    
cufflinks 6.0286 0.0 22.6308    
cufflinks 1.84319 0.0 7.51444   Low
cufflinks 9.35905 0.0 35.5051    
cufflinks 4.82571 0.0 18.3399    
cufflinks 2.64846 0.0 10.005   Low
cufflinks 18.0595 0.0 75.5587   High
cufflinks 15.56 0.0 69.2918   High
cufflinks 6.11979 0.0 22.9215    
cufflinks 3.566       High
cufflinks 0.531       Low
cufflinks 0.816        
cufflinks 1.657        
cufflinks 1.295        
cufflinks 1.353        
cufflinks 2.274        
cufflinks 0.826        
cufflinks 1.679        
cufflinks 1.31        
cufflinks 2.264        
cufflinks 0.425       Low
cufflinks 1.962        
cufflinks 1.935        
cufflinks 0.265       Low
cufflinks 1.934        
cufflinks 0.885        

0 Strain