Gene : Glyma.06G025900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22870:SF195 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN Genomic Order:  259
Name:  ? Glyma.06G025900 Secondary Identifier:  ? PAC:30554222
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G025900 0.5kb upstream 0.5kb upstream 8453 true Chr06: 1983753-1992205 Glycine max
Glyma.06G025900 0.5kb upstream 0.5kb upstream 500 false Chr06: 1991706-1992205 Glycine max
Glyma.06G025900 0.5kb downstream 0.5kb downstream 8453 true Chr06: 1983253-1991705 Glycine max
Glyma.06G025900 0.5kb downstream 0.5kb downstream 500 false Chr06: 1983253-1983752 Glycine max
Glyma.06G025900 1.0kb upstream 1.0kb upstream 8953 true Chr06: 1983753-1992705 Glycine max
Glyma.06G025900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1991706-1992705 Glycine max
Glyma.06G025900 1.0kb downstream 1.0kb downstream 8953 true Chr06: 1982753-1991705 Glycine max
Glyma.06G025900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1982753-1983752 Glycine max
Glyma.06G025900 2.0kb upstream 2.0kb upstream 9953 true Chr06: 1983753-1993705 Glycine max
Glyma.06G025900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1991706-1993705 Glycine max
Glyma.06G025900 2.0kb downstream 2.0kb downstream 9953 true Chr06: 1981753-1991705 Glycine max
Glyma.06G025900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1981753-1983752 Glycine max
Glyma.06G025900 5.0kb upstream 5.0kb upstream 12953 true Chr06: 1983753-1996705 Glycine max
Glyma.06G025900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1991706-1996705 Glycine max
Glyma.06G025900 5.0kb downstream 5.0kb downstream 12953 true Chr06: 1978753-1991705 Glycine max
Glyma.06G025900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1978753-1983752 Glycine max
Glyma.06G025900 10.0kb upstream 10.0kb upstream 17953 true Chr06: 1983753-2001705 Glycine max
Glyma.06G025900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1991706-2001705 Glycine max
Glyma.06G025900 10.0kb downstream 10.0kb downstream 17953 true Chr06: 1973753-1991705 Glycine max
Glyma.06G025900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1973753-1983752 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304201 5265 Fabidae View MSA
124062556 5270 Rosid View MSA
123737000 5271 Pentapetalae View MSA
122793857 5272 Eudicot View MSA
122050415 5273 Angiosperm View MSA
121350788 5274 Embryophyte View MSA
123425107 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.2743 0.0 65.597    
cufflinks 27.8399 0.0 122.856 High High
cufflinks 12.199 0.0 50.8475   Low
cufflinks 21.4015 0.0 91.7284 High  
cufflinks 23.6796 0.0 103.155 High  
cufflinks 12.2107 0.0 49.9199   Low
cufflinks 15.4921 0.0 64.1975    
cufflinks 22.1436 0.0 95.7247 High  
cufflinks 19.7138 0.0 84.3212 High  
cufflinks 1.924        
cufflinks 0.881       Low
cufflinks 2.007        
cufflinks 2.657        
cufflinks 3.319       High
cufflinks 1.04       Low
cufflinks 1.788        
cufflinks 1.974        
cufflinks 1.817        
cufflinks 4.88       High
cufflinks 1.671        
cufflinks 1.268        
cufflinks 1.746        
cufflinks 1.884        
cufflinks 1.288        
cufflinks 1.616        
cufflinks 1.517        

0 Strain