Gene : Glyma.06G027000 G. max Wm82.a2.v1
Defline:  (1 of 44) PF00643 - B-box zinc finger (zf-B_box) Genomic Order:  270
Name:  ? Glyma.06G027000 Secondary Identifier:  ? PAC:30552197
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G027000 0.5kb upstream 0.5kb upstream 1865 true Chr06: 2087092-2088956 Glycine max
Glyma.06G027000 0.5kb upstream 0.5kb upstream 500 false Chr06: 2088457-2088956 Glycine max
Glyma.06G027000 0.5kb downstream 0.5kb downstream 1865 true Chr06: 2086592-2088456 Glycine max
Glyma.06G027000 0.5kb downstream 0.5kb downstream 500 false Chr06: 2086592-2087091 Glycine max
Glyma.06G027000 1.0kb upstream 1.0kb upstream 2365 true Chr06: 2087092-2089456 Glycine max
Glyma.06G027000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 2088457-2089456 Glycine max
Glyma.06G027000 1.0kb downstream 1.0kb downstream 2365 true Chr06: 2086092-2088456 Glycine max
Glyma.06G027000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 2086092-2087091 Glycine max
Glyma.06G027000 2.0kb upstream 2.0kb upstream 3365 true Chr06: 2087092-2090456 Glycine max
Glyma.06G027000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 2088457-2090456 Glycine max
Glyma.06G027000 2.0kb downstream 2.0kb downstream 3365 true Chr06: 2085092-2088456 Glycine max
Glyma.06G027000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 2085092-2087091 Glycine max
Glyma.06G027000 5.0kb upstream 5.0kb upstream 6365 true Chr06: 2087092-2093456 Glycine max
Glyma.06G027000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 2088457-2093456 Glycine max
Glyma.06G027000 5.0kb downstream 5.0kb downstream 6365 true Chr06: 2082092-2088456 Glycine max
Glyma.06G027000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 2082092-2087091 Glycine max
Glyma.06G027000 10.0kb upstream 10.0kb upstream 11365 true Chr06: 2087092-2098456 Glycine max
Glyma.06G027000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 2088457-2098456 Glycine max
Glyma.06G027000 10.0kb downstream 10.0kb downstream 11365 true Chr06: 2077092-2088456 Glycine max
Glyma.06G027000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 2077092-2087091 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122243711 5265 Fabidae Singleton cluster - no MSA
124042380 5270 Rosid View MSA
123612726 5271 Pentapetalae View MSA
122647213 5272 Eudicot View MSA
122049628 5273 Angiosperm View MSA
121350336 5274 Embryophyte View MSA
123427282 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.54267 0.0 5.49577    
cufflinks 0.437404 0.0 1.66717   Low
cufflinks 1.55585 0.0 5.53862    
cufflinks 12.8863 0.0 35.6904    
cufflinks 5.07212 0.0 15.7744    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 9.41599 0.0 26.8847    
cufflinks 26.0548 0.0 69.5951 High High
cufflinks 4.084       High
cufflinks 0.629        
cufflinks 0.454        
cufflinks 7.487     High High
cufflinks 7.083     High High
cufflinks 0.978        
cufflinks 0.638        
cufflinks 5.611       High
cufflinks 0.195        
cufflinks 0.588        
cufflinks 0.103       Low
cufflinks 0.608        
cufflinks 0.216        
cufflinks 0.014     Low Low
cufflinks 0.472        
cufflinks 0.181        
cufflinks 1.62        

0 Strain