Gene : Glyma.06G028300 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  283
Name:  ? Glyma.06G028300 Secondary Identifier:  ? PAC:30553208
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G028300 0.5kb upstream 0.5kb upstream 1828 true Chr06: 2204386-2206213 Glycine max
Glyma.06G028300 0.5kb upstream 0.5kb upstream 500 false Chr06: 2205714-2206213 Glycine max
Glyma.06G028300 0.5kb downstream 0.5kb downstream 1828 true Chr06: 2203886-2205713 Glycine max
Glyma.06G028300 0.5kb downstream 0.5kb downstream 500 false Chr06: 2203886-2204385 Glycine max
Glyma.06G028300 1.0kb upstream 1.0kb upstream 2328 true Chr06: 2204386-2206713 Glycine max
Glyma.06G028300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 2205714-2206713 Glycine max
Glyma.06G028300 1.0kb downstream 1.0kb downstream 2328 true Chr06: 2203386-2205713 Glycine max
Glyma.06G028300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 2203386-2204385 Glycine max
Glyma.06G028300 2.0kb upstream 2.0kb upstream 3328 true Chr06: 2204386-2207713 Glycine max
Glyma.06G028300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 2205714-2207713 Glycine max
Glyma.06G028300 2.0kb downstream 2.0kb downstream 3328 true Chr06: 2202386-2205713 Glycine max
Glyma.06G028300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 2202386-2204385 Glycine max
Glyma.06G028300 5.0kb upstream 5.0kb upstream 6328 true Chr06: 2204386-2210713 Glycine max
Glyma.06G028300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 2205714-2210713 Glycine max
Glyma.06G028300 5.0kb downstream 5.0kb downstream 6328 true Chr06: 2199386-2205713 Glycine max
Glyma.06G028300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 2199386-2204385 Glycine max
Glyma.06G028300 10.0kb upstream 10.0kb upstream 11328 true Chr06: 2204386-2215713 Glycine max
Glyma.06G028300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 2205714-2215713 Glycine max
Glyma.06G028300 10.0kb downstream 10.0kb downstream 11328 true Chr06: 2194386-2205713 Glycine max
Glyma.06G028300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 2194386-2204385 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312723 5265 Fabidae View MSA
124072690 5270 Rosid View MSA
123750816 5271 Pentapetalae View MSA
122794401 5272 Eudicot View MSA
122049756 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349420 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0364815 0.0 0.155466 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0446652 0.0 0.186973 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0337402 0.0 0.144595 Low  
cufflinks 0.748667 0.0 2.7652   High
cufflinks 0.0177117 0.0 0.0801626 Low  
cufflinks 0.0358561 0.0 0.152814 Low  
cufflinks 0.053     Low High
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.039     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low  
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.066       High
cufflinks 0.012     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.036     Low  

0 Strain